Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sdf4Q61112 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sdf4Q61112 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.22■□□□□ 0.99
Sdf4Q61112 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
Sdf4Q61112 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Sdf4Q61112 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Sdf4Q61112 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sdf4Q61112 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sdf4Q61112 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sdf4Q61112 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sdf4Q61112 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Sdf4Q61112 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sdf4Q61112 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sdf4Q61112 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Sdf4Q61112 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Sdf4Q61112 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sdf4Q61112 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Sdf4Q61112 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sdf4Q61112 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sdf4Q61112 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.2■□□□□ 0.98
Sdf4Q61112 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.19■□□□□ 0.98
Sdf4Q61112 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.19■□□□□ 0.98
Sdf4Q61112 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.19■□□□□ 0.98
Sdf4Q61112 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sdf4Q61112 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sdf4Q61112 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sdf4Q61112 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.18■□□□□ 0.98
Sdf4Q61112 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sdf4Q61112 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sdf4Q61112 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Sdf4Q61112 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sdf4Q61112 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.18■□□□□ 0.98
Sdf4Q61112 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sdf4Q61112 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Sdf4Q61112 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sdf4Q61112 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sdf4Q61112 Gm5812-201ENSMUST00000061073 957 ntBASIC21.17■□□□□ 0.98
Sdf4Q61112 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sdf4Q61112 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sdf4Q61112 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sdf4Q61112 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Sdf4Q61112 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.17■□□□□ 0.98
Sdf4Q61112 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sdf4Q61112 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Sdf4Q61112 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sdf4Q61112 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Sdf4Q61112 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Sdf4Q61112 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Sdf4Q61112 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sdf4Q61112 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sdf4Q61112 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Sdf4Q61112 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sdf4Q61112 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.15■□□□□ 0.98
Sdf4Q61112 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.15■□□□□ 0.98
Sdf4Q61112 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sdf4Q61112 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Sdf4Q61112 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sdf4Q61112 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sdf4Q61112 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sdf4Q61112 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sdf4Q61112 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sdf4Q61112 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.14■□□□□ 0.98
Sdf4Q61112 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.14■□□□□ 0.97
Sdf4Q61112 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.14■□□□□ 0.97
Sdf4Q61112 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.14■□□□□ 0.97
Sdf4Q61112 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sdf4Q61112 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sdf4Q61112 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sdf4Q61112 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Sdf4Q61112 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sdf4Q61112 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sdf4Q61112 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sdf4Q61112 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
Sdf4Q61112 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.13■□□□□ 0.97
Sdf4Q61112 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.13■□□□□ 0.97
Sdf4Q61112 Gm10399-202ENSMUST00000202768 748 ntBASIC21.13■□□□□ 0.97
Sdf4Q61112 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
Sdf4Q61112 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sdf4Q61112 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sdf4Q61112 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.13■□□□□ 0.97
Sdf4Q61112 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sdf4Q61112 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sdf4Q61112 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sdf4Q61112 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sdf4Q61112 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sdf4Q61112 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sdf4Q61112 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sdf4Q61112 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sdf4Q61112 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sdf4Q61112 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.11■□□□□ 0.97
Sdf4Q61112 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sdf4Q61112 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sdf4Q61112 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sdf4Q61112 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sdf4Q61112 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
Sdf4Q61112 Gm15820-201ENSMUST00000201566 728 ntBASIC21.1■□□□□ 0.97
Sdf4Q61112 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sdf4Q61112 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sdf4Q61112 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sdf4Q61112 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms