Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Foxd3Q61060 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Foxd3Q61060 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Foxd3Q61060 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.07■□□□□ 0.64
Foxd3Q61060 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.07■□□□□ 0.64
Foxd3Q61060 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Foxd3Q61060 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Foxd3Q61060 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Foxd3Q61060 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Foxd3Q61060 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Foxd3Q61060 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Foxd3Q61060 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.06■□□□□ 0.64
Foxd3Q61060 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.06■□□□□ 0.64
Foxd3Q61060 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Foxd3Q61060 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Foxd3Q61060 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Foxd3Q61060 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Foxd3Q61060 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Foxd3Q61060 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Foxd3Q61060 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Foxd3Q61060 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Foxd3Q61060 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Foxd3Q61060 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Foxd3Q61060 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Foxd3Q61060 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Foxd3Q61060 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Foxd3Q61060 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Foxd3Q61060 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Foxd3Q61060 Gm13238-201ENSMUST00000117655 780 ntBASIC19.04■□□□□ 0.64
Foxd3Q61060 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Foxd3Q61060 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Foxd3Q61060 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Foxd3Q61060 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Foxd3Q61060 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.03■□□□□ 0.64
Foxd3Q61060 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Foxd3Q61060 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.03■□□□□ 0.64
Foxd3Q61060 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Foxd3Q61060 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Foxd3Q61060 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Foxd3Q61060 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Foxd3Q61060 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Foxd3Q61060 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.02■□□□□ 0.64
Foxd3Q61060 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.02■□□□□ 0.64
Foxd3Q61060 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Foxd3Q61060 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.02■□□□□ 0.64
Foxd3Q61060 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.02■□□□□ 0.64
Foxd3Q61060 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Foxd3Q61060 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Foxd3Q61060 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Foxd3Q61060 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Foxd3Q61060 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Foxd3Q61060 Gm15820-201ENSMUST00000201566 728 ntBASIC19.01■□□□□ 0.63
Foxd3Q61060 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.01■□□□□ 0.63
Foxd3Q61060 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Foxd3Q61060 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.01■□□□□ 0.63
Foxd3Q61060 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Foxd3Q61060 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Foxd3Q61060 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19■□□□□ 0.63
Foxd3Q61060 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19■□□□□ 0.63
Foxd3Q61060 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Foxd3Q61060 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19■□□□□ 0.63
Foxd3Q61060 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Foxd3Q61060 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19■□□□□ 0.63
Foxd3Q61060 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Foxd3Q61060 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Foxd3Q61060 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Foxd3Q61060 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Foxd3Q61060 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Foxd3Q61060 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Foxd3Q61060 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Foxd3Q61060 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Foxd3Q61060 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.99■□□□□ 0.63
Foxd3Q61060 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Foxd3Q61060 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Foxd3Q61060 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Foxd3Q61060 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Foxd3Q61060 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Foxd3Q61060 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Foxd3Q61060 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Foxd3Q61060 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Foxd3Q61060 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Foxd3Q61060 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Foxd3Q61060 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Foxd3Q61060 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Foxd3Q61060 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Foxd3Q61060 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Foxd3Q61060 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Foxd3Q61060 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.97■□□□□ 0.63
Foxd3Q61060 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Foxd3Q61060 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Foxd3Q61060 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Foxd3Q61060 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Foxd3Q61060 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Foxd3Q61060 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.96■□□□□ 0.63
Foxd3Q61060 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Foxd3Q61060 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.96■□□□□ 0.63
Foxd3Q61060 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Foxd3Q61060 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Foxd3Q61060 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Foxd3Q61060 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms