Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Trav2Q5R1I9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav2Q5R1I9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav2Q5R1I9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav2Q5R1I9 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav2Q5R1I9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.64■□□□□ 0.25
Trav2Q5R1I9 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav2Q5R1I9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav2Q5R1I9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav2Q5R1I9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav2Q5R1I9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav2Q5R1I9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trav2Q5R1I9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav2Q5R1I9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav2Q5R1I9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav2Q5R1I9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trav2Q5R1I9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav2Q5R1I9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Trav2Q5R1I9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.63■□□□□ 0.25
Trav2Q5R1I9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Trav2Q5R1I9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav2Q5R1I9 Gm13241-201ENSMUST00000094493 780 ntBASIC16.63■□□□□ 0.25
Trav2Q5R1I9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav2Q5R1I9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav2Q5R1I9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav2Q5R1I9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav2Q5R1I9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav2Q5R1I9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
Trav2Q5R1I9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav2Q5R1I9 Gm9847-201ENSMUST00000052528 599 ntBASIC16.62■□□□□ 0.25
Trav2Q5R1I9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav2Q5R1I9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav2Q5R1I9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav2Q5R1I9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav2Q5R1I9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav2Q5R1I9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav2Q5R1I9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trav2Q5R1I9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
Trav2Q5R1I9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav2Q5R1I9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trav2Q5R1I9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Trav2Q5R1I9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.61■□□□□ 0.25
Trav2Q5R1I9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trav2Q5R1I9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav2Q5R1I9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC16.6■□□□□ 0.25
Trav2Q5R1I9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trav2Q5R1I9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav2Q5R1I9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav2Q5R1I9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav2Q5R1I9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trav2Q5R1I9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav2Q5R1I9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav2Q5R1I9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav2Q5R1I9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav2Q5R1I9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav2Q5R1I9 Gm12922-201ENSMUST00000120626 809 ntBASIC16.59■□□□□ 0.25
Trav2Q5R1I9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav2Q5R1I9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav2Q5R1I9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.59■□□□□ 0.25
Trav2Q5R1I9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav2Q5R1I9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.59■□□□□ 0.25
Trav2Q5R1I9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav2Q5R1I9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav2Q5R1I9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav2Q5R1I9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trav2Q5R1I9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.58■□□□□ 0.25
Trav2Q5R1I9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav2Q5R1I9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trav2Q5R1I9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav2Q5R1I9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav2Q5R1I9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav2Q5R1I9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav2Q5R1I9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav2Q5R1I9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav2Q5R1I9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav2Q5R1I9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav2Q5R1I9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav2Q5R1I9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.57■□□□□ 0.24
Trav2Q5R1I9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.57■□□□□ 0.24
Trav2Q5R1I9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trav2Q5R1I9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav2Q5R1I9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trav2Q5R1I9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Trav2Q5R1I9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav2Q5R1I9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.56■□□□□ 0.24
Trav2Q5R1I9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav2Q5R1I9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav2Q5R1I9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Trav2Q5R1I9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trav2Q5R1I9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav2Q5R1I9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC16.56■□□□□ 0.24
Trav2Q5R1I9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16.56■□□□□ 0.24
Trav2Q5R1I9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav2Q5R1I9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav2Q5R1I9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav2Q5R1I9 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.55■□□□□ 0.24
Trav2Q5R1I9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.55■□□□□ 0.24
Trav2Q5R1I9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trav2Q5R1I9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.55■□□□□ 0.24
Trav2Q5R1I9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms