Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav3-1Q5R1I8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav3-1Q5R1I8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3-1Q5R1I8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3-1Q5R1I8 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3-1Q5R1I8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav3-1Q5R1I8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3-1Q5R1I8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3-1Q5R1I8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3-1Q5R1I8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3-1Q5R1I8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3-1Q5R1I8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3-1Q5R1I8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3-1Q5R1I8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3-1Q5R1I8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3-1Q5R1I8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC14.24□□□□□ -0.13
Trav3-1Q5R1I8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3-1Q5R1I8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
Trav3-1Q5R1I8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3-1Q5R1I8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3-1Q5R1I8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3-1Q5R1I8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3-1Q5R1I8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3-1Q5R1I8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3-1Q5R1I8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav3-1Q5R1I8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3-1Q5R1I8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3-1Q5R1I8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3-1Q5R1I8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3-1Q5R1I8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3-1Q5R1I8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3-1Q5R1I8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3-1Q5R1I8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav3-1Q5R1I8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav3-1Q5R1I8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trav3-1Q5R1I8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav3-1Q5R1I8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
Trav3-1Q5R1I8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav3-1Q5R1I8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Trav3-1Q5R1I8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Trav3-1Q5R1I8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav3-1Q5R1I8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav3-1Q5R1I8 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav3-1Q5R1I8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav3-1Q5R1I8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Trav3-1Q5R1I8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav3-1Q5R1I8 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav3-1Q5R1I8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav3-1Q5R1I8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav3-1Q5R1I8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav3-1Q5R1I8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav3-1Q5R1I8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav3-1Q5R1I8 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav3-1Q5R1I8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.21□□□□□ -0.14
Trav3-1Q5R1I8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav3-1Q5R1I8 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trav3-1Q5R1I8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav3-1Q5R1I8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav3-1Q5R1I8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav3-1Q5R1I8 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav3-1Q5R1I8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav3-1Q5R1I8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3-1Q5R1I8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav3-1Q5R1I8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav3-1Q5R1I8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3-1Q5R1I8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3-1Q5R1I8 AL845457.1-201ENSMUST00000197244 68 ntBASIC14.19□□□□□ -0.14
Trav3-1Q5R1I8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Trav3-1Q5R1I8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3-1Q5R1I8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3-1Q5R1I8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3-1Q5R1I8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3-1Q5R1I8 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.19□□□□□ -0.14
Trav3-1Q5R1I8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3-1Q5R1I8 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav3-1Q5R1I8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav3-1Q5R1I8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3-1Q5R1I8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3-1Q5R1I8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3-1Q5R1I8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3-1Q5R1I8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3-1Q5R1I8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Trav3-1Q5R1I8 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3-1Q5R1I8 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3-1Q5R1I8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3-1Q5R1I8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3-1Q5R1I8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3-1Q5R1I8 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3-1Q5R1I8 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3-1Q5R1I8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3-1Q5R1I8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3-1Q5R1I8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3-1Q5R1I8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3-1Q5R1I8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3-1Q5R1I8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3-1Q5R1I8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3-1Q5R1I8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3-1Q5R1I8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3-1Q5R1I8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3-1Q5R1I8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms