Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.62■□□□□ 0.41
Trav6d-4Q5R1I0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6d-4Q5R1I0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6d-4Q5R1I0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
Trav6d-4Q5R1I0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.61■□□□□ 0.41
Trav6d-4Q5R1I0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.61■□□□□ 0.41
Trav6d-4Q5R1I0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6d-4Q5R1I0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6d-4Q5R1I0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6d-4Q5R1I0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trav6d-4Q5R1I0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6d-4Q5R1I0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6d-4Q5R1I0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trav6d-4Q5R1I0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6d-4Q5R1I0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6d-4Q5R1I0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.6■□□□□ 0.41
Trav6d-4Q5R1I0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trav6d-4Q5R1I0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6d-4Q5R1I0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.6■□□□□ 0.41
Trav6d-4Q5R1I0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6d-4Q5R1I0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6d-4Q5R1I0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6d-4Q5R1I0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6d-4Q5R1I0 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6d-4Q5R1I0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6d-4Q5R1I0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav6d-4Q5R1I0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav6d-4Q5R1I0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav6d-4Q5R1I0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.58■□□□□ 0.4
Trav6d-4Q5R1I0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trav6d-4Q5R1I0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav6d-4Q5R1I0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav6d-4Q5R1I0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav6d-4Q5R1I0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trav6d-4Q5R1I0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav6d-4Q5R1I0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav6d-4Q5R1I0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav6d-4Q5R1I0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Trav6d-4Q5R1I0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav6d-4Q5R1I0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav6d-4Q5R1I0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav6d-4Q5R1I0 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav6d-4Q5R1I0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Trav6d-4Q5R1I0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trav6d-4Q5R1I0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Trav6d-4Q5R1I0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6d-4Q5R1I0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6d-4Q5R1I0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6d-4Q5R1I0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6d-4Q5R1I0 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6d-4Q5R1I0 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.56■□□□□ 0.4
Trav6d-4Q5R1I0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Trav6d-4Q5R1I0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6d-4Q5R1I0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6d-4Q5R1I0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6d-4Q5R1I0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6d-4Q5R1I0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6d-4Q5R1I0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.55■□□□□ 0.4
Trav6d-4Q5R1I0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6d-4Q5R1I0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6d-4Q5R1I0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6d-4Q5R1I0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trav6d-4Q5R1I0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6d-4Q5R1I0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6d-4Q5R1I0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6d-4Q5R1I0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6d-4Q5R1I0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6d-4Q5R1I0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6d-4Q5R1I0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6d-4Q5R1I0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6d-4Q5R1I0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6d-4Q5R1I0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Trav6d-4Q5R1I0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6d-4Q5R1I0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6d-4Q5R1I0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6d-4Q5R1I0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6d-4Q5R1I0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
Trav6d-4Q5R1I0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.52■□□□□ 0.4
Trav6d-4Q5R1I0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6d-4Q5R1I0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6d-4Q5R1I0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6d-4Q5R1I0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6d-4Q5R1I0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trav6d-4Q5R1I0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6d-4Q5R1I0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6d-4Q5R1I0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6d-4Q5R1I0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trav6d-4Q5R1I0 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6d-4Q5R1I0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6d-4Q5R1I0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.5■□□□□ 0.39
Trav6d-4Q5R1I0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6d-4Q5R1I0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6d-4Q5R1I0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6d-4Q5R1I0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6d-4Q5R1I0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6d-4Q5R1I0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6d-4Q5R1I0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.5■□□□□ 0.39
Trav6d-4Q5R1I0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trav6d-4Q5R1I0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6d-4Q5R1I0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms