Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav8d-1Q5R1H8 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav8d-1Q5R1H8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Trav8d-1Q5R1H8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav8d-1Q5R1H8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav8d-1Q5R1H8 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav8d-1Q5R1H8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav8d-1Q5R1H8 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav8d-1Q5R1H8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav8d-1Q5R1H8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav8d-1Q5R1H8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav8d-1Q5R1H8 Gm44428-201ENSMUST00000204474 874 ntBASIC16.97■□□□□ 0.31
Trav8d-1Q5R1H8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav8d-1Q5R1H8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav8d-1Q5R1H8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trav8d-1Q5R1H8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav8d-1Q5R1H8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav8d-1Q5R1H8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC16.96■□□□□ 0.31
Trav8d-1Q5R1H8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trav8d-1Q5R1H8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC16.96■□□□□ 0.31
Trav8d-1Q5R1H8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav8d-1Q5R1H8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16.96■□□□□ 0.31
Trav8d-1Q5R1H8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.96■□□□□ 0.31
Trav8d-1Q5R1H8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav8d-1Q5R1H8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav8d-1Q5R1H8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.96■□□□□ 0.31
Trav8d-1Q5R1H8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC16.96■□□□□ 0.31
Trav8d-1Q5R1H8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.96■□□□□ 0.31
Trav8d-1Q5R1H8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trav8d-1Q5R1H8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav8d-1Q5R1H8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav8d-1Q5R1H8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.96■□□□□ 0.31
Trav8d-1Q5R1H8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav8d-1Q5R1H8 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav8d-1Q5R1H8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Trav8d-1Q5R1H8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC16.96■□□□□ 0.3
Trav8d-1Q5R1H8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
Trav8d-1Q5R1H8 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav8d-1Q5R1H8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav8d-1Q5R1H8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.95■□□□□ 0.3
Trav8d-1Q5R1H8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC16.95■□□□□ 0.3
Trav8d-1Q5R1H8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav8d-1Q5R1H8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav8d-1Q5R1H8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav8d-1Q5R1H8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav8d-1Q5R1H8 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trav8d-1Q5R1H8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.95■□□□□ 0.3
Trav8d-1Q5R1H8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav8d-1Q5R1H8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav8d-1Q5R1H8 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav8d-1Q5R1H8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8d-1Q5R1H8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8d-1Q5R1H8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8d-1Q5R1H8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8d-1Q5R1H8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8d-1Q5R1H8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.94■□□□□ 0.3
Trav8d-1Q5R1H8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8d-1Q5R1H8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8d-1Q5R1H8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8d-1Q5R1H8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8d-1Q5R1H8 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trav8d-1Q5R1H8 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8d-1Q5R1H8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8d-1Q5R1H8 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8d-1Q5R1H8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trav8d-1Q5R1H8 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.93■□□□□ 0.3
Trav8d-1Q5R1H8 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.93■□□□□ 0.3
Trav8d-1Q5R1H8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trav8d-1Q5R1H8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trav8d-1Q5R1H8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8d-1Q5R1H8 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8d-1Q5R1H8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8d-1Q5R1H8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8d-1Q5R1H8 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.93■□□□□ 0.3
Trav8d-1Q5R1H8 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8d-1Q5R1H8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8d-1Q5R1H8 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8d-1Q5R1H8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8d-1Q5R1H8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Trav8d-1Q5R1H8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Trav8d-1Q5R1H8 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav8d-1Q5R1H8 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav8d-1Q5R1H8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav8d-1Q5R1H8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8d-1Q5R1H8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trav8d-1Q5R1H8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8d-1Q5R1H8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.91■□□□□ 0.3
Trav8d-1Q5R1H8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8d-1Q5R1H8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8d-1Q5R1H8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Trav8d-1Q5R1H8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav8d-1Q5R1H8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav8d-1Q5R1H8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav8d-1Q5R1H8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav8d-1Q5R1H8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.9■□□□□ 0.3
Trav8d-1Q5R1H8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav8d-1Q5R1H8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav8d-1Q5R1H8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav8d-1Q5R1H8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav8d-1Q5R1H8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms