Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trav5d-4Q5R1F6 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trav5d-4Q5R1F6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav5d-4Q5R1F6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Trav5d-4Q5R1F6 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav5d-4Q5R1F6 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav5d-4Q5R1F6 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.95■□□□□ 0.46
Trav5d-4Q5R1F6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.95■□□□□ 0.46
Trav5d-4Q5R1F6 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav5d-4Q5R1F6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav5d-4Q5R1F6 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trav5d-4Q5R1F6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav5d-4Q5R1F6 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.95■□□□□ 0.46
Trav5d-4Q5R1F6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Trav5d-4Q5R1F6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Trav5d-4Q5R1F6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav5d-4Q5R1F6 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav5d-4Q5R1F6 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav5d-4Q5R1F6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.94■□□□□ 0.46
Trav5d-4Q5R1F6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.94■□□□□ 0.46
Trav5d-4Q5R1F6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav5d-4Q5R1F6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav5d-4Q5R1F6 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav5d-4Q5R1F6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav5d-4Q5R1F6 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav5d-4Q5R1F6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav5d-4Q5R1F6 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav5d-4Q5R1F6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav5d-4Q5R1F6 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav5d-4Q5R1F6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav5d-4Q5R1F6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.93■□□□□ 0.46
Trav5d-4Q5R1F6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Trav5d-4Q5R1F6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav5d-4Q5R1F6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav5d-4Q5R1F6 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav5d-4Q5R1F6 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav5d-4Q5R1F6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav5d-4Q5R1F6 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.92■□□□□ 0.46
Trav5d-4Q5R1F6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav5d-4Q5R1F6 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.92■□□□□ 0.46
Trav5d-4Q5R1F6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.92■□□□□ 0.46
Trav5d-4Q5R1F6 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav5d-4Q5R1F6 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav5d-4Q5R1F6 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Trav5d-4Q5R1F6 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav5d-4Q5R1F6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav5d-4Q5R1F6 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Trav5d-4Q5R1F6 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav5d-4Q5R1F6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.91■□□□□ 0.46
Trav5d-4Q5R1F6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav5d-4Q5R1F6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav5d-4Q5R1F6 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.91■□□□□ 0.46
Trav5d-4Q5R1F6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav5d-4Q5R1F6 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.91■□□□□ 0.46
Trav5d-4Q5R1F6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav5d-4Q5R1F6 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav5d-4Q5R1F6 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav5d-4Q5R1F6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.91■□□□□ 0.46
Trav5d-4Q5R1F6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav5d-4Q5R1F6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav5d-4Q5R1F6 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
Trav5d-4Q5R1F6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav5d-4Q5R1F6 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav5d-4Q5R1F6 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.9■□□□□ 0.46
Trav5d-4Q5R1F6 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.9■□□□□ 0.46
Trav5d-4Q5R1F6 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav5d-4Q5R1F6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav5d-4Q5R1F6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav5d-4Q5R1F6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav5d-4Q5R1F6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trav5d-4Q5R1F6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav5d-4Q5R1F6 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.89■□□□□ 0.45
Trav5d-4Q5R1F6 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.89■□□□□ 0.45
Trav5d-4Q5R1F6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav5d-4Q5R1F6 Gm45444-201ENSMUST00000211394 898 ntBASIC17.89■□□□□ 0.45
Trav5d-4Q5R1F6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav5d-4Q5R1F6 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Trav5d-4Q5R1F6 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav5d-4Q5R1F6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav5d-4Q5R1F6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav5d-4Q5R1F6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Trav5d-4Q5R1F6 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav5d-4Q5R1F6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.88■□□□□ 0.45
Trav5d-4Q5R1F6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav5d-4Q5R1F6 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav5d-4Q5R1F6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav5d-4Q5R1F6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav5d-4Q5R1F6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav5d-4Q5R1F6 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav5d-4Q5R1F6 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav5d-4Q5R1F6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trav5d-4Q5R1F6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav5d-4Q5R1F6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav5d-4Q5R1F6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav5d-4Q5R1F6 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav5d-4Q5R1F6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.87■□□□□ 0.45
Trav5d-4Q5R1F6 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trav5d-4Q5R1F6 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav5d-4Q5R1F6 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav5d-4Q5R1F6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 170.2 ms