Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC24.95■■□□□ 1.58
Rnf20Q5DTM8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rnf20Q5DTM8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Rnf20Q5DTM8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC24.94■■□□□ 1.58
Rnf20Q5DTM8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rnf20Q5DTM8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Rnf20Q5DTM8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
Rnf20Q5DTM8 Gm13238-201ENSMUST00000117655 780 ntBASIC24.93■■□□□ 1.58
Rnf20Q5DTM8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Rnf20Q5DTM8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Rnf20Q5DTM8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Rnf20Q5DTM8 Gm12504-201ENSMUST00000120860 2231 ntBASIC24.92■■□□□ 1.58
Rnf20Q5DTM8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC24.92■■□□□ 1.58
Rnf20Q5DTM8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
Rnf20Q5DTM8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Rnf20Q5DTM8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Rnf20Q5DTM8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Rnf20Q5DTM8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Rnf20Q5DTM8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Rnf20Q5DTM8 Gm16464-201ENSMUST00000117815 1095 ntBASIC24.91■■□□□ 1.58
Rnf20Q5DTM8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
Rnf20Q5DTM8 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
Rnf20Q5DTM8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Rnf20Q5DTM8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
Rnf20Q5DTM8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Rnf20Q5DTM8 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
Rnf20Q5DTM8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Rnf20Q5DTM8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Rnf20Q5DTM8 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Rnf20Q5DTM8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC24.9■■□□□ 1.58
Rnf20Q5DTM8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Rnf20Q5DTM8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Rnf20Q5DTM8 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC24.89■■□□□ 1.58
Rnf20Q5DTM8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC24.89■■□□□ 1.57
Rnf20Q5DTM8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Rnf20Q5DTM8 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Rnf20Q5DTM8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC24.88■■□□□ 1.57
Rnf20Q5DTM8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Rnf20Q5DTM8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Rnf20Q5DTM8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Rnf20Q5DTM8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Rnf20Q5DTM8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Rnf20Q5DTM8 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Rnf20Q5DTM8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
Rnf20Q5DTM8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
Rnf20Q5DTM8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Rnf20Q5DTM8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Rnf20Q5DTM8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Rnf20Q5DTM8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Rnf20Q5DTM8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Rnf20Q5DTM8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Rnf20Q5DTM8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Rnf20Q5DTM8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
Rnf20Q5DTM8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Rnf20Q5DTM8 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
Rnf20Q5DTM8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
Rnf20Q5DTM8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC24.84■■□□□ 1.57
Rnf20Q5DTM8 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Rnf20Q5DTM8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Rnf20Q5DTM8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Rnf20Q5DTM8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
Rnf20Q5DTM8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Rnf20Q5DTM8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Rnf20Q5DTM8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Rnf20Q5DTM8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.56
Rnf20Q5DTM8 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC24.83■■□□□ 1.56
Rnf20Q5DTM8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Rnf20Q5DTM8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Rnf20Q5DTM8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Rnf20Q5DTM8 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Rnf20Q5DTM8 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Rnf20Q5DTM8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Rnf20Q5DTM8 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
Rnf20Q5DTM8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Rnf20Q5DTM8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC24.81■■□□□ 1.56
Rnf20Q5DTM8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC24.81■■□□□ 1.56
Rnf20Q5DTM8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC24.81■■□□□ 1.56
Rnf20Q5DTM8 Gm44949-201ENSMUST00000206423 1450 ntBASIC24.81■■□□□ 1.56
Rnf20Q5DTM8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC24.81■■□□□ 1.56
Rnf20Q5DTM8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
Rnf20Q5DTM8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Rnf20Q5DTM8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
Rnf20Q5DTM8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Rnf20Q5DTM8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Rnf20Q5DTM8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Rnf20Q5DTM8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Rnf20Q5DTM8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Rnf20Q5DTM8 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Rnf20Q5DTM8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Rnf20Q5DTM8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Rnf20Q5DTM8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Rnf20Q5DTM8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Rnf20Q5DTM8 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
Rnf20Q5DTM8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Rnf20Q5DTM8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC24.78■■□□□ 1.56
Rnf20Q5DTM8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Rnf20Q5DTM8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
Rnf20Q5DTM8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
Rnf20Q5DTM8 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Rnf20Q5DTM8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms