Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rc3h1Q4VGL6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Rc3h1Q4VGL6 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
Rc3h1Q4VGL6 Gm13241-201ENSMUST00000094493 780 ntBASIC24.37■■□□□ 1.49
Rc3h1Q4VGL6 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC24.37■■□□□ 1.49
Rc3h1Q4VGL6 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC24.37■■□□□ 1.49
Rc3h1Q4VGL6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rc3h1Q4VGL6 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC24.36■■□□□ 1.49
Rc3h1Q4VGL6 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Rc3h1Q4VGL6 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC24.36■■□□□ 1.49
Rc3h1Q4VGL6 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC24.36■■□□□ 1.49
Rc3h1Q4VGL6 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Rc3h1Q4VGL6 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC24.36■■□□□ 1.49
Rc3h1Q4VGL6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Rc3h1Q4VGL6 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rc3h1Q4VGL6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Rc3h1Q4VGL6 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rc3h1Q4VGL6 Gm43034-201ENSMUST00000198678 1364 ntBASIC24.35■■□□□ 1.49
Rc3h1Q4VGL6 Gm15039-201ENSMUST00000118914 875 ntBASIC24.35■■□□□ 1.49
Rc3h1Q4VGL6 Gm12922-201ENSMUST00000120626 809 ntBASIC24.35■■□□□ 1.49
Rc3h1Q4VGL6 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rc3h1Q4VGL6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rc3h1Q4VGL6 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rc3h1Q4VGL6 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rc3h1Q4VGL6 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Rc3h1Q4VGL6 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC24.34■■□□□ 1.49
Rc3h1Q4VGL6 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rc3h1Q4VGL6 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rc3h1Q4VGL6 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rc3h1Q4VGL6 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Rc3h1Q4VGL6 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Rc3h1Q4VGL6 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rc3h1Q4VGL6 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rc3h1Q4VGL6 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rc3h1Q4VGL6 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC24.33■■□□□ 1.49
Rc3h1Q4VGL6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC24.33■■□□□ 1.49
Rc3h1Q4VGL6 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rc3h1Q4VGL6 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Rc3h1Q4VGL6 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rc3h1Q4VGL6 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Rc3h1Q4VGL6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Rc3h1Q4VGL6 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rc3h1Q4VGL6 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rc3h1Q4VGL6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Rc3h1Q4VGL6 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Rc3h1Q4VGL6 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC24.32■■□□□ 1.48
Rc3h1Q4VGL6 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC24.32■■□□□ 1.48
Rc3h1Q4VGL6 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC24.32■■□□□ 1.48
Rc3h1Q4VGL6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rc3h1Q4VGL6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rc3h1Q4VGL6 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rc3h1Q4VGL6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rc3h1Q4VGL6 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rc3h1Q4VGL6 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rc3h1Q4VGL6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rc3h1Q4VGL6 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC24.3■■□□□ 1.48
Rc3h1Q4VGL6 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rc3h1Q4VGL6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rc3h1Q4VGL6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC24.3■■□□□ 1.48
Rc3h1Q4VGL6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rc3h1Q4VGL6 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC24.29■■□□□ 1.48
Rc3h1Q4VGL6 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rc3h1Q4VGL6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC24.28■■□□□ 1.48
Rc3h1Q4VGL6 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rc3h1Q4VGL6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Rc3h1Q4VGL6 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC24.28■■□□□ 1.48
Rc3h1Q4VGL6 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rc3h1Q4VGL6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rc3h1Q4VGL6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rc3h1Q4VGL6 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
Rc3h1Q4VGL6 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC24.28■■□□□ 1.48
Rc3h1Q4VGL6 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rc3h1Q4VGL6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Rc3h1Q4VGL6 Gm4430-201ENSMUST00000192413 1943 ntBASIC24.27■■□□□ 1.48
Rc3h1Q4VGL6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rc3h1Q4VGL6 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rc3h1Q4VGL6 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rc3h1Q4VGL6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rc3h1Q4VGL6 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
Rc3h1Q4VGL6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Rc3h1Q4VGL6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Rc3h1Q4VGL6 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Rc3h1Q4VGL6 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC24.26■■□□□ 1.47
Rc3h1Q4VGL6 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC24.26■■□□□ 1.47
Rc3h1Q4VGL6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Rc3h1Q4VGL6 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rc3h1Q4VGL6 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC24.25■■□□□ 1.47
Rc3h1Q4VGL6 Golgb1-201ENSMUST00000023534 498 ntBASIC24.25■■□□□ 1.47
Rc3h1Q4VGL6 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rc3h1Q4VGL6 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
Rc3h1Q4VGL6 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC24.25■■□□□ 1.47
Rc3h1Q4VGL6 Gm42418-201ENSMUST00000182010 1831 ntBASIC24.25■■□□□ 1.47
Rc3h1Q4VGL6 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Rc3h1Q4VGL6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rc3h1Q4VGL6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
Rc3h1Q4VGL6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Rc3h1Q4VGL6 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Rc3h1Q4VGL6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Rc3h1Q4VGL6 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Rc3h1Q4VGL6 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC24.24■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms