Protein–RNA interactions for Protein: Q3USW5

Foxred2, FAD-dependent oxidoreductase domain-containing protein 2, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxred2Q3USW5 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Foxred2Q3USW5 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Foxred2Q3USW5 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Foxred2Q3USW5 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Foxred2Q3USW5 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
Foxred2Q3USW5 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Foxred2Q3USW5 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.34■■□□□ 1.01
Foxred2Q3USW5 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Foxred2Q3USW5 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Foxred2Q3USW5 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Foxred2Q3USW5 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Foxred2Q3USW5 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Foxred2Q3USW5 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Foxred2Q3USW5 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Foxred2Q3USW5 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Foxred2Q3USW5 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Foxred2Q3USW5 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Foxred2Q3USW5 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Foxred2Q3USW5 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.32■■□□□ 1
Foxred2Q3USW5 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Foxred2Q3USW5 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Foxred2Q3USW5 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Foxred2Q3USW5 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.32■■□□□ 1
Foxred2Q3USW5 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Foxred2Q3USW5 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Foxred2Q3USW5 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.32■■□□□ 1
Foxred2Q3USW5 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Foxred2Q3USW5 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Foxred2Q3USW5 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.31■■□□□ 1
Foxred2Q3USW5 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Foxred2Q3USW5 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Foxred2Q3USW5 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.31■■□□□ 1
Foxred2Q3USW5 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Foxred2Q3USW5 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Foxred2Q3USW5 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Foxred2Q3USW5 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.31■■□□□ 1
Foxred2Q3USW5 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Foxred2Q3USW5 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.31■■□□□ 1
Foxred2Q3USW5 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.3■■□□□ 1
Foxred2Q3USW5 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Foxred2Q3USW5 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Foxred2Q3USW5 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.3■■□□□ 1
Foxred2Q3USW5 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Foxred2Q3USW5 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Foxred2Q3USW5 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Foxred2Q3USW5 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.3■■□□□ 1
Foxred2Q3USW5 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Foxred2Q3USW5 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.29■■□□□ 1
Foxred2Q3USW5 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.29■■□□□ 1
Foxred2Q3USW5 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.29■■□□□ 1
Foxred2Q3USW5 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.28■■□□□ 1
Foxred2Q3USW5 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Foxred2Q3USW5 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Foxred2Q3USW5 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Foxred2Q3USW5 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Foxred2Q3USW5 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Foxred2Q3USW5 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Foxred2Q3USW5 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.27■■□□□ 1
Foxred2Q3USW5 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Foxred2Q3USW5 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Foxred2Q3USW5 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Foxred2Q3USW5 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Foxred2Q3USW5 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Foxred2Q3USW5 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Foxred2Q3USW5 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Foxred2Q3USW5 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Foxred2Q3USW5 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Foxred2Q3USW5 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Foxred2Q3USW5 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.26■□□□□ 0.99
Foxred2Q3USW5 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Foxred2Q3USW5 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Foxred2Q3USW5 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Foxred2Q3USW5 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.26■□□□□ 0.99
Foxred2Q3USW5 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Foxred2Q3USW5 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Foxred2Q3USW5 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Foxred2Q3USW5 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Foxred2Q3USW5 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Foxred2Q3USW5 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Foxred2Q3USW5 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Foxred2Q3USW5 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Foxred2Q3USW5 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Foxred2Q3USW5 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Foxred2Q3USW5 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Foxred2Q3USW5 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.24■□□□□ 0.99
Foxred2Q3USW5 Gm10232-201ENSMUST00000089221 720 ntBASIC21.24■□□□□ 0.99
Foxred2Q3USW5 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Foxred2Q3USW5 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Foxred2Q3USW5 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.23■□□□□ 0.99
Foxred2Q3USW5 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Foxred2Q3USW5 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Foxred2Q3USW5 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Foxred2Q3USW5 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Foxred2Q3USW5 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Foxred2Q3USW5 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.22■□□□□ 0.99
Foxred2Q3USW5 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Foxred2Q3USW5 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Foxred2Q3USW5 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Foxred2Q3USW5 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Foxred2Q3USW5 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms