Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lsmem1Q3UQS2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Lsmem1Q3UQS2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lsmem1Q3UQS2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lsmem1Q3UQS2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Lsmem1Q3UQS2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lsmem1Q3UQS2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lsmem1Q3UQS2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lsmem1Q3UQS2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.33■■□□□ 1.01
Lsmem1Q3UQS2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.33■■□□□ 1.01
Lsmem1Q3UQS2 Gm40881-201ENSMUST00000223397 166 ntBASIC21.33■■□□□ 1.01
Lsmem1Q3UQS2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Lsmem1Q3UQS2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Lsmem1Q3UQS2 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lsmem1Q3UQS2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.32■■□□□ 1
Lsmem1Q3UQS2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lsmem1Q3UQS2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.32■■□□□ 1
Lsmem1Q3UQS2 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.32■■□□□ 1
Lsmem1Q3UQS2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lsmem1Q3UQS2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lsmem1Q3UQS2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lsmem1Q3UQS2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Lsmem1Q3UQS2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lsmem1Q3UQS2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Lsmem1Q3UQS2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.31■■□□□ 1
Lsmem1Q3UQS2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lsmem1Q3UQS2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lsmem1Q3UQS2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lsmem1Q3UQS2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.3■■□□□ 1
Lsmem1Q3UQS2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.3■■□□□ 1
Lsmem1Q3UQS2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lsmem1Q3UQS2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lsmem1Q3UQS2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.3■■□□□ 1
Lsmem1Q3UQS2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Lsmem1Q3UQS2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lsmem1Q3UQS2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.29■■□□□ 1
Lsmem1Q3UQS2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.29■■□□□ 1
Lsmem1Q3UQS2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.29■■□□□ 1
Lsmem1Q3UQS2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lsmem1Q3UQS2 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.29■■□□□ 1
Lsmem1Q3UQS2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lsmem1Q3UQS2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.29■■□□□ 1
Lsmem1Q3UQS2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.29■■□□□ 1
Lsmem1Q3UQS2 Gm9959-201ENSMUST00000068277 390 ntBASIC21.29■■□□□ 1
Lsmem1Q3UQS2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Lsmem1Q3UQS2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lsmem1Q3UQS2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lsmem1Q3UQS2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.28■■□□□ 1
Lsmem1Q3UQS2 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lsmem1Q3UQS2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.28■■□□□ 1
Lsmem1Q3UQS2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.28■■□□□ 1
Lsmem1Q3UQS2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lsmem1Q3UQS2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Lsmem1Q3UQS2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lsmem1Q3UQS2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lsmem1Q3UQS2 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Lsmem1Q3UQS2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Lsmem1Q3UQS2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lsmem1Q3UQS2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lsmem1Q3UQS2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lsmem1Q3UQS2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.26■□□□□ 0.99
Lsmem1Q3UQS2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lsmem1Q3UQS2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lsmem1Q3UQS2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lsmem1Q3UQS2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lsmem1Q3UQS2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lsmem1Q3UQS2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lsmem1Q3UQS2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.26■□□□□ 0.99
Lsmem1Q3UQS2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lsmem1Q3UQS2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lsmem1Q3UQS2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Lsmem1Q3UQS2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lsmem1Q3UQS2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lsmem1Q3UQS2 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lsmem1Q3UQS2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lsmem1Q3UQS2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
Lsmem1Q3UQS2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Lsmem1Q3UQS2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lsmem1Q3UQS2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lsmem1Q3UQS2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.24■□□□□ 0.99
Lsmem1Q3UQS2 Gm45102-201ENSMUST00000207427 857 ntBASIC21.24■□□□□ 0.99
Lsmem1Q3UQS2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Lsmem1Q3UQS2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lsmem1Q3UQS2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lsmem1Q3UQS2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.24■□□□□ 0.99
Lsmem1Q3UQS2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lsmem1Q3UQS2 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lsmem1Q3UQS2 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Lsmem1Q3UQS2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lsmem1Q3UQS2 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lsmem1Q3UQS2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lsmem1Q3UQS2 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lsmem1Q3UQS2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lsmem1Q3UQS2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.22■□□□□ 0.99
Lsmem1Q3UQS2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lsmem1Q3UQS2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lsmem1Q3UQS2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lsmem1Q3UQS2 Etf1-202ENSMUST00000180351 108 ntBASIC21.22■□□□□ 0.99
Lsmem1Q3UQS2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lsmem1Q3UQS2 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms