Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Arhgef40Q3UPH7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
Arhgef40Q3UPH7 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
Arhgef40Q3UPH7 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
Arhgef40Q3UPH7 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
Arhgef40Q3UPH7 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
Arhgef40Q3UPH7 Gm10657-201ENSMUST00000193528 1031 ntBASIC31.51■■■□□ 2.63
Arhgef40Q3UPH7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC31.51■■■□□ 2.63
Arhgef40Q3UPH7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
Arhgef40Q3UPH7 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC31.51■■■□□ 2.63
Arhgef40Q3UPH7 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Arhgef40Q3UPH7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Arhgef40Q3UPH7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
Arhgef40Q3UPH7 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Arhgef40Q3UPH7 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Arhgef40Q3UPH7 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Arhgef40Q3UPH7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Arhgef40Q3UPH7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
Arhgef40Q3UPH7 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Arhgef40Q3UPH7 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
Arhgef40Q3UPH7 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
Arhgef40Q3UPH7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
Arhgef40Q3UPH7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Arhgef40Q3UPH7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Arhgef40Q3UPH7 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
Arhgef40Q3UPH7 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Arhgef40Q3UPH7 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Arhgef40Q3UPH7 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
Arhgef40Q3UPH7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Arhgef40Q3UPH7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Arhgef40Q3UPH7 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC31.46■■■□□ 2.63
Arhgef40Q3UPH7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC31.46■■■□□ 2.63
Arhgef40Q3UPH7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC31.46■■■□□ 2.63
Arhgef40Q3UPH7 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Arhgef40Q3UPH7 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
Arhgef40Q3UPH7 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
Arhgef40Q3UPH7 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Arhgef40Q3UPH7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC31.46■■■□□ 2.63
Arhgef40Q3UPH7 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC31.46■■■□□ 2.63
Arhgef40Q3UPH7 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Arhgef40Q3UPH7 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC31.45■■■□□ 2.63
Arhgef40Q3UPH7 Gm43137-201ENSMUST00000198052 594 ntBASIC31.45■■■□□ 2.63
Arhgef40Q3UPH7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
Arhgef40Q3UPH7 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Arhgef40Q3UPH7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Arhgef40Q3UPH7 Gm4430-201ENSMUST00000192413 1943 ntBASIC31.44■■■□□ 2.62
Arhgef40Q3UPH7 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Arhgef40Q3UPH7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Arhgef40Q3UPH7 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC31.44■■■□□ 2.62
Arhgef40Q3UPH7 AC164629.5-201ENSMUST00000220387 632 ntBASIC31.44■■■□□ 2.62
Arhgef40Q3UPH7 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Arhgef40Q3UPH7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Arhgef40Q3UPH7 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Arhgef40Q3UPH7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Arhgef40Q3UPH7 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
Arhgef40Q3UPH7 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC31.43■■■□□ 2.62
Arhgef40Q3UPH7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Arhgef40Q3UPH7 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Arhgef40Q3UPH7 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Arhgef40Q3UPH7 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
Arhgef40Q3UPH7 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
Arhgef40Q3UPH7 Gm12251-201ENSMUST00000117893 792 ntBASIC31.41■■■□□ 2.62
Arhgef40Q3UPH7 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Arhgef40Q3UPH7 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Arhgef40Q3UPH7 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Arhgef40Q3UPH7 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC31.41■■■□□ 2.62
Arhgef40Q3UPH7 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
Arhgef40Q3UPH7 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC31.4■■■□□ 2.62
Arhgef40Q3UPH7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC31.4■■■□□ 2.62
Arhgef40Q3UPH7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Arhgef40Q3UPH7 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Arhgef40Q3UPH7 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
Arhgef40Q3UPH7 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC31.39■■■□□ 2.62
Arhgef40Q3UPH7 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC31.39■■■□□ 2.62
Arhgef40Q3UPH7 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
Arhgef40Q3UPH7 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
Arhgef40Q3UPH7 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC31.38■■■□□ 2.61
Arhgef40Q3UPH7 Gm43017-201ENSMUST00000198296 752 ntBASIC31.38■■■□□ 2.61
Arhgef40Q3UPH7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Arhgef40Q3UPH7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC31.37■■■□□ 2.61
Arhgef40Q3UPH7 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Arhgef40Q3UPH7 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Arhgef40Q3UPH7 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
Arhgef40Q3UPH7 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Arhgef40Q3UPH7 Gm8770-201ENSMUST00000121113 1109 ntBASIC31.35■■■□□ 2.61
Arhgef40Q3UPH7 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
Arhgef40Q3UPH7 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Arhgef40Q3UPH7 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Arhgef40Q3UPH7 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Arhgef40Q3UPH7 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
Arhgef40Q3UPH7 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
Arhgef40Q3UPH7 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
Arhgef40Q3UPH7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Arhgef40Q3UPH7 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC31.33■■■□□ 2.61
Arhgef40Q3UPH7 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Arhgef40Q3UPH7 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC31.32■■■□□ 2.6
Arhgef40Q3UPH7 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Arhgef40Q3UPH7 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Arhgef40Q3UPH7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Arhgef40Q3UPH7 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC31.32■■■□□ 2.6
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms