Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cks1brtQ3UNC9 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Cks1brtQ3UNC9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cks1brtQ3UNC9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cks1brtQ3UNC9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cks1brtQ3UNC9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cks1brtQ3UNC9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cks1brtQ3UNC9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Cks1brtQ3UNC9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cks1brtQ3UNC9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cks1brtQ3UNC9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cks1brtQ3UNC9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cks1brtQ3UNC9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cks1brtQ3UNC9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC15.12■□□□□ 0.01
Cks1brtQ3UNC9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cks1brtQ3UNC9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cks1brtQ3UNC9 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cks1brtQ3UNC9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cks1brtQ3UNC9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Cks1brtQ3UNC9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC15.12■□□□□ 0.01
Cks1brtQ3UNC9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cks1brtQ3UNC9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cks1brtQ3UNC9 Gm15043-201ENSMUST00000118843 1543 ntBASIC15.12■□□□□ 0.01
Cks1brtQ3UNC9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Cks1brtQ3UNC9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cks1brtQ3UNC9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cks1brtQ3UNC9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC15.11■□□□□ 0.01
Cks1brtQ3UNC9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC15.11■□□□□ 0.01
Cks1brtQ3UNC9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cks1brtQ3UNC9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cks1brtQ3UNC9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cks1brtQ3UNC9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cks1brtQ3UNC9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cks1brtQ3UNC9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cks1brtQ3UNC9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cks1brtQ3UNC9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cks1brtQ3UNC9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
Cks1brtQ3UNC9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cks1brtQ3UNC9 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Cks1brtQ3UNC9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cks1brtQ3UNC9 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cks1brtQ3UNC9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cks1brtQ3UNC9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cks1brtQ3UNC9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Cks1brtQ3UNC9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cks1brtQ3UNC9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Cks1brtQ3UNC9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cks1brtQ3UNC9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cks1brtQ3UNC9 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC15.09■□□□□ 0.01
Cks1brtQ3UNC9 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cks1brtQ3UNC9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Cks1brtQ3UNC9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Cks1brtQ3UNC9 Gm28731-201ENSMUST00000185564 1569 ntBASIC15.08■□□□□ 0
Cks1brtQ3UNC9 Gm4430-201ENSMUST00000192413 1943 ntBASIC15.08■□□□□ 0
Cks1brtQ3UNC9 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cks1brtQ3UNC9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC15.08■□□□□ 0
Cks1brtQ3UNC9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Cks1brtQ3UNC9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Cks1brtQ3UNC9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Cks1brtQ3UNC9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cks1brtQ3UNC9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cks1brtQ3UNC9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cks1brtQ3UNC9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cks1brtQ3UNC9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cks1brtQ3UNC9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cks1brtQ3UNC9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC15.07■□□□□ 0
Cks1brtQ3UNC9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cks1brtQ3UNC9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Cks1brtQ3UNC9 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cks1brtQ3UNC9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cks1brtQ3UNC9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Cks1brtQ3UNC9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Cks1brtQ3UNC9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cks1brtQ3UNC9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Cks1brtQ3UNC9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC15.06■□□□□ 0
Cks1brtQ3UNC9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cks1brtQ3UNC9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Cks1brtQ3UNC9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cks1brtQ3UNC9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cks1brtQ3UNC9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
Cks1brtQ3UNC9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cks1brtQ3UNC9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Cks1brtQ3UNC9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cks1brtQ3UNC9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Cks1brtQ3UNC9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cks1brtQ3UNC9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cks1brtQ3UNC9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cks1brtQ3UNC9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Cks1brtQ3UNC9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Cks1brtQ3UNC9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC15.05■□□□□ -0
Cks1brtQ3UNC9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cks1brtQ3UNC9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cks1brtQ3UNC9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Cks1brtQ3UNC9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cks1brtQ3UNC9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Cks1brtQ3UNC9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Cks1brtQ3UNC9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cks1brtQ3UNC9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cks1brtQ3UNC9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cks1brtQ3UNC9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 159.2 ms