Protein–RNA interactions for Protein: Q3UMF0

Cobll1, Cordon-bleu protein-like 1, mousemouse

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cobll1Q3UMF0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Cobll1Q3UMF0 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cobll1Q3UMF0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cobll1Q3UMF0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cobll1Q3UMF0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cobll1Q3UMF0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.51■□□□□ 0.71
Cobll1Q3UMF0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cobll1Q3UMF0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cobll1Q3UMF0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cobll1Q3UMF0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Cobll1Q3UMF0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cobll1Q3UMF0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cobll1Q3UMF0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Cobll1Q3UMF0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.5■□□□□ 0.71
Cobll1Q3UMF0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.5■□□□□ 0.71
Cobll1Q3UMF0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.5■□□□□ 0.71
Cobll1Q3UMF0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cobll1Q3UMF0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cobll1Q3UMF0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cobll1Q3UMF0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cobll1Q3UMF0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cobll1Q3UMF0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cobll1Q3UMF0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Cobll1Q3UMF0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cobll1Q3UMF0 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.49■□□□□ 0.71
Cobll1Q3UMF0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cobll1Q3UMF0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cobll1Q3UMF0 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.49■□□□□ 0.71
Cobll1Q3UMF0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Cobll1Q3UMF0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cobll1Q3UMF0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cobll1Q3UMF0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cobll1Q3UMF0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cobll1Q3UMF0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.48■□□□□ 0.71
Cobll1Q3UMF0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.48■□□□□ 0.71
Cobll1Q3UMF0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cobll1Q3UMF0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cobll1Q3UMF0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cobll1Q3UMF0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cobll1Q3UMF0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Cobll1Q3UMF0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cobll1Q3UMF0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cobll1Q3UMF0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cobll1Q3UMF0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cobll1Q3UMF0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Cobll1Q3UMF0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cobll1Q3UMF0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cobll1Q3UMF0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cobll1Q3UMF0 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.46■□□□□ 0.71
Cobll1Q3UMF0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cobll1Q3UMF0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cobll1Q3UMF0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cobll1Q3UMF0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.45■□□□□ 0.7
Cobll1Q3UMF0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.45■□□□□ 0.7
Cobll1Q3UMF0 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cobll1Q3UMF0 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.45■□□□□ 0.7
Cobll1Q3UMF0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
Cobll1Q3UMF0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cobll1Q3UMF0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cobll1Q3UMF0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Cobll1Q3UMF0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cobll1Q3UMF0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cobll1Q3UMF0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cobll1Q3UMF0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Cobll1Q3UMF0 Gm7417-201ENSMUST00000192950 473 ntBASIC19.43■□□□□ 0.7
Cobll1Q3UMF0 Gm40881-201ENSMUST00000223397 166 ntBASIC19.43■□□□□ 0.7
Cobll1Q3UMF0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Cobll1Q3UMF0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cobll1Q3UMF0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cobll1Q3UMF0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cobll1Q3UMF0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cobll1Q3UMF0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cobll1Q3UMF0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cobll1Q3UMF0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.42■□□□□ 0.7
Cobll1Q3UMF0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cobll1Q3UMF0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cobll1Q3UMF0 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cobll1Q3UMF0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cobll1Q3UMF0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cobll1Q3UMF0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cobll1Q3UMF0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cobll1Q3UMF0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.41■□□□□ 0.7
Cobll1Q3UMF0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cobll1Q3UMF0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cobll1Q3UMF0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cobll1Q3UMF0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cobll1Q3UMF0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Cobll1Q3UMF0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.4■□□□□ 0.7
Cobll1Q3UMF0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.4■□□□□ 0.7
Cobll1Q3UMF0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
Cobll1Q3UMF0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cobll1Q3UMF0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Cobll1Q3UMF0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Cobll1Q3UMF0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cobll1Q3UMF0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.39■□□□□ 0.69
Cobll1Q3UMF0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cobll1Q3UMF0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cobll1Q3UMF0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Cobll1Q3UMF0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cobll1Q3UMF0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms