Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops9Q3U898 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cops9Q3U898 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC14.44□□□□□ -0.1
Cops9Q3U898 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops9Q3U898 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cops9Q3U898 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops9Q3U898 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops9Q3U898 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops9Q3U898 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops9Q3U898 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops9Q3U898 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cops9Q3U898 Gm37136-201ENSMUST00000194368 194 ntBASIC14.43□□□□□ -0.1
Cops9Q3U898 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops9Q3U898 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops9Q3U898 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops9Q3U898 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops9Q3U898 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cops9Q3U898 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops9Q3U898 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops9Q3U898 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops9Q3U898 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC14.42□□□□□ -0.1
Cops9Q3U898 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
Cops9Q3U898 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cops9Q3U898 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC14.41□□□□□ -0.1
Cops9Q3U898 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC14.41□□□□□ -0.1
Cops9Q3U898 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops9Q3U898 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops9Q3U898 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops9Q3U898 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
Cops9Q3U898 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops9Q3U898 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cops9Q3U898 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cops9Q3U898 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cops9Q3U898 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cops9Q3U898 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cops9Q3U898 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC14.4□□□□□ -0.1
Cops9Q3U898 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops9Q3U898 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops9Q3U898 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops9Q3U898 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.4□□□□□ -0.1
Cops9Q3U898 AC115037.1-201ENSMUST00000223391 2173 ntBASIC14.4□□□□□ -0.1
Cops9Q3U898 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cops9Q3U898 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops9Q3U898 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops9Q3U898 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC14.39□□□□□ -0.11
Cops9Q3U898 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops9Q3U898 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops9Q3U898 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cops9Q3U898 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Cops9Q3U898 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cops9Q3U898 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops9Q3U898 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cops9Q3U898 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops9Q3U898 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops9Q3U898 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops9Q3U898 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cops9Q3U898 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cops9Q3U898 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops9Q3U898 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops9Q3U898 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cops9Q3U898 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cops9Q3U898 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops9Q3U898 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cops9Q3U898 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cops9Q3U898 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops9Q3U898 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cops9Q3U898 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cops9Q3U898 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops9Q3U898 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops9Q3U898 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops9Q3U898 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops9Q3U898 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cops9Q3U898 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC14.37□□□□□ -0.11
Cops9Q3U898 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops9Q3U898 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops9Q3U898 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops9Q3U898 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops9Q3U898 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC14.36□□□□□ -0.11
Cops9Q3U898 AC164433.2-201ENSMUST00000226346 1701 ntBASIC14.36□□□□□ -0.11
Cops9Q3U898 Gm4430-201ENSMUST00000192413 1943 ntBASIC14.36□□□□□ -0.11
Cops9Q3U898 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cops9Q3U898 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cops9Q3U898 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cops9Q3U898 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops9Q3U898 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC14.36□□□□□ -0.11
Cops9Q3U898 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops9Q3U898 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops9Q3U898 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops9Q3U898 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops9Q3U898 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops9Q3U898 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cops9Q3U898 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops9Q3U898 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC14.35□□□□□ -0.11
Cops9Q3U898 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cops9Q3U898 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops9Q3U898 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cops9Q3U898 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops9Q3U898 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cops9Q3U898 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops9Q3U898 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms