Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.37■□□□□ 0.69
Chd8Q09XV5 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chd8Q09XV5 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.37■□□□□ 0.69
Chd8Q09XV5 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chd8Q09XV5 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chd8Q09XV5 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Chd8Q09XV5 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.36■□□□□ 0.69
Chd8Q09XV5 Gm4968-201ENSMUST00000071458 858 ntBASIC19.36■□□□□ 0.69
Chd8Q09XV5 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chd8Q09XV5 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chd8Q09XV5 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chd8Q09XV5 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chd8Q09XV5 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Chd8Q09XV5 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Chd8Q09XV5 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chd8Q09XV5 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Chd8Q09XV5 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Chd8Q09XV5 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Chd8Q09XV5 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chd8Q09XV5 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Chd8Q09XV5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chd8Q09XV5 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chd8Q09XV5 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.34■□□□□ 0.69
Chd8Q09XV5 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chd8Q09XV5 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chd8Q09XV5 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Chd8Q09XV5 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chd8Q09XV5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.33■□□□□ 0.68
Chd8Q09XV5 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Chd8Q09XV5 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chd8Q09XV5 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chd8Q09XV5 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.33■□□□□ 0.68
Chd8Q09XV5 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Chd8Q09XV5 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Chd8Q09XV5 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.32■□□□□ 0.68
Chd8Q09XV5 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Chd8Q09XV5 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.32■□□□□ 0.68
Chd8Q09XV5 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.32■□□□□ 0.68
Chd8Q09XV5 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.32■□□□□ 0.68
Chd8Q09XV5 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chd8Q09XV5 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Chd8Q09XV5 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chd8Q09XV5 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Chd8Q09XV5 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Chd8Q09XV5 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chd8Q09XV5 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Chd8Q09XV5 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chd8Q09XV5 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chd8Q09XV5 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chd8Q09XV5 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Chd8Q09XV5 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chd8Q09XV5 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.3■□□□□ 0.68
Chd8Q09XV5 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.3■□□□□ 0.68
Chd8Q09XV5 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Chd8Q09XV5 Gm9870-201ENSMUST00000063874 645 ntBASIC19.29■□□□□ 0.68
Chd8Q09XV5 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd8Q09XV5 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.29■□□□□ 0.68
Chd8Q09XV5 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd8Q09XV5 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd8Q09XV5 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chd8Q09XV5 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd8Q09XV5 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Chd8Q09XV5 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.28■□□□□ 0.68
Chd8Q09XV5 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.27■□□□□ 0.68
Chd8Q09XV5 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.27■□□□□ 0.68
Chd8Q09XV5 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Chd8Q09XV5 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chd8Q09XV5 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.27■□□□□ 0.67
Chd8Q09XV5 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Chd8Q09XV5 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd8Q09XV5 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd8Q09XV5 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Chd8Q09XV5 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.26■□□□□ 0.67
Chd8Q09XV5 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chd8Q09XV5 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.26■□□□□ 0.67
Chd8Q09XV5 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd8Q09XV5 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd8Q09XV5 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Chd8Q09XV5 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.25■□□□□ 0.67
Chd8Q09XV5 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd8Q09XV5 Gm10819-201ENSMUST00000099988 561 ntBASIC19.25■□□□□ 0.67
Chd8Q09XV5 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd8Q09XV5 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.24■□□□□ 0.67
Chd8Q09XV5 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.24■□□□□ 0.67
Chd8Q09XV5 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chd8Q09XV5 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chd8Q09XV5 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.24■□□□□ 0.67
Chd8Q09XV5 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chd8Q09XV5 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chd8Q09XV5 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.24■□□□□ 0.67
Chd8Q09XV5 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chd8Q09XV5 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd8Q09XV5 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.23■□□□□ 0.67
Chd8Q09XV5 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.23■□□□□ 0.67
Chd8Q09XV5 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd8Q09XV5 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd8Q09XV5 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd8Q09XV5 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.23■□□□□ 0.67
Chd8Q09XV5 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd8Q09XV5 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms