Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H3f3aP84244 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
H3f3aP84244 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
H3f3aP84244 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H3f3aP84244 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H3f3aP84244 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H3f3aP84244 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
H3f3aP84244 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H3f3aP84244 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H3f3aP84244 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H3f3aP84244 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.65■□□□□ 0.58
H3f3aP84244 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.65■□□□□ 0.58
H3f3aP84244 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.65■□□□□ 0.58
H3f3aP84244 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
H3f3aP84244 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
H3f3aP84244 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H3f3aP84244 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
H3f3aP84244 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
H3f3aP84244 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.64■□□□□ 0.57
H3f3aP84244 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
H3f3aP84244 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
H3f3aP84244 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
H3f3aP84244 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
H3f3aP84244 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.63■□□□□ 0.57
H3f3aP84244 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
H3f3aP84244 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
H3f3aP84244 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
H3f3aP84244 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
H3f3aP84244 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
H3f3aP84244 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.62■□□□□ 0.57
H3f3aP84244 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
H3f3aP84244 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
H3f3aP84244 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
H3f3aP84244 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
H3f3aP84244 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
H3f3aP84244 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H3f3aP84244 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.61■□□□□ 0.57
H3f3aP84244 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
H3f3aP84244 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H3f3aP84244 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
H3f3aP84244 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
H3f3aP84244 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.6■□□□□ 0.57
H3f3aP84244 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
H3f3aP84244 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.6■□□□□ 0.57
H3f3aP84244 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.6■□□□□ 0.57
H3f3aP84244 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
H3f3aP84244 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
H3f3aP84244 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
H3f3aP84244 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
H3f3aP84244 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.59■□□□□ 0.57
H3f3aP84244 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
H3f3aP84244 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
H3f3aP84244 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.59■□□□□ 0.57
H3f3aP84244 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
H3f3aP84244 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
H3f3aP84244 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
H3f3aP84244 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
H3f3aP84244 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
H3f3aP84244 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
H3f3aP84244 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
H3f3aP84244 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
H3f3aP84244 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
H3f3aP84244 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
H3f3aP84244 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
H3f3aP84244 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
H3f3aP84244 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.58■□□□□ 0.56
H3f3aP84244 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
H3f3aP84244 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
H3f3aP84244 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
H3f3aP84244 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
H3f3aP84244 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
H3f3aP84244 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
H3f3aP84244 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
H3f3aP84244 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
H3f3aP84244 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.57■□□□□ 0.56
H3f3aP84244 Gm40881-201ENSMUST00000223397 166 ntBASIC18.57■□□□□ 0.56
H3f3aP84244 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
H3f3aP84244 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.56■□□□□ 0.56
H3f3aP84244 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
H3f3aP84244 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H3f3aP84244 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
H3f3aP84244 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H3f3aP84244 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.56■□□□□ 0.56
H3f3aP84244 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H3f3aP84244 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.56■□□□□ 0.56
H3f3aP84244 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H3f3aP84244 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H3f3aP84244 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
H3f3aP84244 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H3f3aP84244 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H3f3aP84244 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.55■□□□□ 0.56
H3f3aP84244 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
H3f3aP84244 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
H3f3aP84244 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.55■□□□□ 0.56
H3f3aP84244 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H3f3aP84244 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
H3f3aP84244 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H3f3aP84244 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H3f3aP84244 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
H3f3aP84244 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms