Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim4P70271 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Pdlim4P70271 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pdlim4P70271 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim4P70271 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim4P70271 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim4P70271 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pdlim4P70271 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pdlim4P70271 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.33■□□□□ 0.37
Pdlim4P70271 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pdlim4P70271 Gm15546-201ENSMUST00000122095 826 ntBASIC17.33■□□□□ 0.36
Pdlim4P70271 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.33■□□□□ 0.36
Pdlim4P70271 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.33■□□□□ 0.36
Pdlim4P70271 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
Pdlim4P70271 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pdlim4P70271 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pdlim4P70271 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim4P70271 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim4P70271 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim4P70271 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim4P70271 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim4P70271 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim4P70271 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim4P70271 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim4P70271 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.31■□□□□ 0.36
Pdlim4P70271 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.31■□□□□ 0.36
Pdlim4P70271 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.31■□□□□ 0.36
Pdlim4P70271 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim4P70271 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim4P70271 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim4P70271 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim4P70271 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Pdlim4P70271 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.31■□□□□ 0.36
Pdlim4P70271 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Pdlim4P70271 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdlim4P70271 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdlim4P70271 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdlim4P70271 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Pdlim4P70271 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.3■□□□□ 0.36
Pdlim4P70271 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pdlim4P70271 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim4P70271 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pdlim4P70271 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim4P70271 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pdlim4P70271 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.29■□□□□ 0.36
Pdlim4P70271 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.29■□□□□ 0.36
Pdlim4P70271 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim4P70271 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim4P70271 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim4P70271 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim4P70271 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim4P70271 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim4P70271 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.28■□□□□ 0.36
Pdlim4P70271 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.28■□□□□ 0.36
Pdlim4P70271 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim4P70271 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pdlim4P70271 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim4P70271 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim4P70271 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pdlim4P70271 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.28■□□□□ 0.36
Pdlim4P70271 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdlim4P70271 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pdlim4P70271 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pdlim4P70271 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.27■□□□□ 0.35
Pdlim4P70271 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.27■□□□□ 0.35
Pdlim4P70271 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Pdlim4P70271 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim4P70271 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim4P70271 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.26■□□□□ 0.35
Pdlim4P70271 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.26■□□□□ 0.35
Pdlim4P70271 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Pdlim4P70271 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim4P70271 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim4P70271 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim4P70271 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim4P70271 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim4P70271 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim4P70271 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim4P70271 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim4P70271 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim4P70271 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim4P70271 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim4P70271 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Pdlim4P70271 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim4P70271 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Pdlim4P70271 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim4P70271 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Pdlim4P70271 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim4P70271 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim4P70271 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pdlim4P70271 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim4P70271 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim4P70271 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim4P70271 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim4P70271 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim4P70271 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim4P70271 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim4P70271 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.23■□□□□ 0.35
Pdlim4P70271 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim4P70271 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 7.7 ms