Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lim2P56563 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lim2P56563 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.95■□□□□ 0.94
Lim2P56563 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lim2P56563 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lim2P56563 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lim2P56563 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lim2P56563 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lim2P56563 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lim2P56563 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.95■□□□□ 0.94
Lim2P56563 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Lim2P56563 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.94■□□□□ 0.94
Lim2P56563 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Lim2P56563 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lim2P56563 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Lim2P56563 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lim2P56563 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Lim2P56563 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lim2P56563 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.93■□□□□ 0.94
Lim2P56563 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.93■□□□□ 0.94
Lim2P56563 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lim2P56563 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lim2P56563 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lim2P56563 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lim2P56563 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Lim2P56563 Rps24-207ENSMUST00000224568 714 ntBASIC20.92■□□□□ 0.94
Lim2P56563 Gm9959-201ENSMUST00000068277 390 ntBASIC20.92■□□□□ 0.94
Lim2P56563 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lim2P56563 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lim2P56563 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lim2P56563 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lim2P56563 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lim2P56563 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
Lim2P56563 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Lim2P56563 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lim2P56563 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lim2P56563 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.91■□□□□ 0.94
Lim2P56563 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.91■□□□□ 0.94
Lim2P56563 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lim2P56563 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lim2P56563 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lim2P56563 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.9■□□□□ 0.94
Lim2P56563 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lim2P56563 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.9■□□□□ 0.94
Lim2P56563 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Lim2P56563 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lim2P56563 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Lim2P56563 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lim2P56563 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lim2P56563 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.89■□□□□ 0.93
Lim2P56563 Gm45102-201ENSMUST00000207427 857 ntBASIC20.89■□□□□ 0.93
Lim2P56563 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.89■□□□□ 0.93
Lim2P56563 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lim2P56563 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lim2P56563 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Lim2P56563 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lim2P56563 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lim2P56563 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lim2P56563 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lim2P56563 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.88■□□□□ 0.93
Lim2P56563 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Lim2P56563 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lim2P56563 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lim2P56563 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lim2P56563 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lim2P56563 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lim2P56563 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.87■□□□□ 0.93
Lim2P56563 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lim2P56563 Gm14117-201ENSMUST00000122417 843 ntBASIC20.87■□□□□ 0.93
Lim2P56563 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.87■□□□□ 0.93
Lim2P56563 Gm10399-202ENSMUST00000202768 748 ntBASIC20.87■□□□□ 0.93
Lim2P56563 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Lim2P56563 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.87■□□□□ 0.93
Lim2P56563 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Lim2P56563 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lim2P56563 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lim2P56563 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Lim2P56563 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.86■□□□□ 0.93
Lim2P56563 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Lim2P56563 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Lim2P56563 Etf1-202ENSMUST00000180351 108 ntBASIC20.86■□□□□ 0.93
Lim2P56563 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.86■□□□□ 0.93
Lim2P56563 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.86■□□□□ 0.93
Lim2P56563 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lim2P56563 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Lim2P56563 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.85■□□□□ 0.93
Lim2P56563 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lim2P56563 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lim2P56563 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lim2P56563 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lim2P56563 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lim2P56563 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lim2P56563 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lim2P56563 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lim2P56563 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lim2P56563 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lim2P56563 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Lim2P56563 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Lim2P56563 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lim2P56563 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms