Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Hmgcs2P54869 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Hmgcs2P54869 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Hmgcs2P54869 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Hmgcs2P54869 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Hmgcs2P54869 Gm2011-201ENSMUST00000203124 1263 ntBASIC23.52■■□□□ 1.36
Hmgcs2P54869 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Hmgcs2P54869 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Hmgcs2P54869 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.51■■□□□ 1.35
Hmgcs2P54869 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Hmgcs2P54869 AC115037.1-201ENSMUST00000223391 2173 ntBASIC23.51■■□□□ 1.35
Hmgcs2P54869 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Hmgcs2P54869 Kdm3b-204ENSMUST00000224715 2032 ntBASIC23.51■■□□□ 1.35
Hmgcs2P54869 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Hmgcs2P54869 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Hmgcs2P54869 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Hmgcs2P54869 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
Hmgcs2P54869 Krt8-ps-201ENSMUST00000208495 945 ntBASIC23.51■■□□□ 1.35
Hmgcs2P54869 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Hmgcs2P54869 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Hmgcs2P54869 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.51■■□□□ 1.35
Hmgcs2P54869 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Hmgcs2P54869 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Hmgcs2P54869 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC23.5■■□□□ 1.35
Hmgcs2P54869 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Hmgcs2P54869 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Hmgcs2P54869 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Hmgcs2P54869 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC23.5■■□□□ 1.35
Hmgcs2P54869 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Hmgcs2P54869 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Hmgcs2P54869 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC23.49■■□□□ 1.35
Hmgcs2P54869 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Hmgcs2P54869 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC23.49■■□□□ 1.35
Hmgcs2P54869 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Hmgcs2P54869 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Hmgcs2P54869 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Hmgcs2P54869 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Hmgcs2P54869 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
Hmgcs2P54869 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Hmgcs2P54869 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC23.48■■□□□ 1.35
Hmgcs2P54869 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Hmgcs2P54869 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Hmgcs2P54869 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Hmgcs2P54869 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
Hmgcs2P54869 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Hmgcs2P54869 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Hmgcs2P54869 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Hmgcs2P54869 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Hmgcs2P54869 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Hmgcs2P54869 Mir7075-201ENSMUST00000184187 82 ntBASIC23.47■■□□□ 1.35
Hmgcs2P54869 Flvcr1-202ENSMUST00000191946 1216 ntBASIC23.47■■□□□ 1.35
Hmgcs2P54869 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Hmgcs2P54869 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Hmgcs2P54869 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Hmgcs2P54869 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Hmgcs2P54869 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Hmgcs2P54869 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC23.46■■□□□ 1.35
Hmgcs2P54869 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Hmgcs2P54869 Gm10657-201ENSMUST00000193528 1031 ntBASIC23.46■■□□□ 1.35
Hmgcs2P54869 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Hmgcs2P54869 Slc35b2-207ENSMUST00000226086 850 ntBASIC23.46■■□□□ 1.35
Hmgcs2P54869 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Hmgcs2P54869 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Hmgcs2P54869 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
Hmgcs2P54869 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Hmgcs2P54869 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Hmgcs2P54869 H3f3aos-201ENSMUST00000097448 2905 ntBASIC23.45■■□□□ 1.34
Hmgcs2P54869 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Hmgcs2P54869 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC23.45■■□□□ 1.34
Hmgcs2P54869 Gm8495-201ENSMUST00000188740 694 ntBASIC23.45■■□□□ 1.34
Hmgcs2P54869 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Hmgcs2P54869 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
Hmgcs2P54869 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
Hmgcs2P54869 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Hmgcs2P54869 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Hmgcs2P54869 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC23.44■■□□□ 1.34
Hmgcs2P54869 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC23.44■■□□□ 1.34
Hmgcs2P54869 Gm18284-201ENSMUST00000172604 624 ntBASIC23.44■■□□□ 1.34
Hmgcs2P54869 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Hmgcs2P54869 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Hmgcs2P54869 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC23.43■■□□□ 1.34
Hmgcs2P54869 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Hmgcs2P54869 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Hmgcs2P54869 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
Hmgcs2P54869 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Hmgcs2P54869 Gm43017-201ENSMUST00000198296 752 ntBASIC23.43■■□□□ 1.34
Hmgcs2P54869 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Hmgcs2P54869 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Hmgcs2P54869 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC23.42■■□□□ 1.34
Hmgcs2P54869 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Hmgcs2P54869 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC23.42■■□□□ 1.34
Hmgcs2P54869 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Hmgcs2P54869 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Hmgcs2P54869 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Hmgcs2P54869 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Hmgcs2P54869 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Hmgcs2P54869 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC23.41■■□□□ 1.34
Hmgcs2P54869 Gm7143-201ENSMUST00000222811 859 ntBASIC23.41■■□□□ 1.34
Hmgcs2P54869 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC23.41■■□□□ 1.34
Hmgcs2P54869 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms