Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RoraP51448 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RoraP51448 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RoraP51448 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RoraP51448 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RoraP51448 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RoraP51448 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.74■□□□□ 0.75
RoraP51448 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RoraP51448 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RoraP51448 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RoraP51448 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RoraP51448 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RoraP51448 Gm21956-201ENSMUST00000179946 522 ntBASIC19.73■□□□□ 0.75
RoraP51448 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RoraP51448 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RoraP51448 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RoraP51448 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RoraP51448 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RoraP51448 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.73■□□□□ 0.75
RoraP51448 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RoraP51448 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RoraP51448 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RoraP51448 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.72■□□□□ 0.75
RoraP51448 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RoraP51448 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RoraP51448 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RoraP51448 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.72■□□□□ 0.75
RoraP51448 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.72■□□□□ 0.75
RoraP51448 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.72■□□□□ 0.75
RoraP51448 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RoraP51448 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RoraP51448 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RoraP51448 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RoraP51448 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RoraP51448 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RoraP51448 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
RoraP51448 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RoraP51448 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RoraP51448 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RoraP51448 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
RoraP51448 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RoraP51448 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RoraP51448 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RoraP51448 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RoraP51448 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RoraP51448 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RoraP51448 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.7■□□□□ 0.74
RoraP51448 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RoraP51448 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RoraP51448 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
RoraP51448 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RoraP51448 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RoraP51448 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RoraP51448 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.69■□□□□ 0.74
RoraP51448 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RoraP51448 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.69■□□□□ 0.74
RoraP51448 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.69■□□□□ 0.74
RoraP51448 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RoraP51448 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RoraP51448 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RoraP51448 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RoraP51448 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RoraP51448 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RoraP51448 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.68■□□□□ 0.74
RoraP51448 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RoraP51448 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RoraP51448 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RoraP51448 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.67■□□□□ 0.74
RoraP51448 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RoraP51448 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RoraP51448 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.67■□□□□ 0.74
RoraP51448 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RoraP51448 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RoraP51448 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RoraP51448 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RoraP51448 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RoraP51448 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RoraP51448 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RoraP51448 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RoraP51448 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
RoraP51448 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RoraP51448 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.65■□□□□ 0.74
RoraP51448 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RoraP51448 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
RoraP51448 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RoraP51448 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RoraP51448 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.65■□□□□ 0.74
RoraP51448 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.65■□□□□ 0.74
RoraP51448 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.64■□□□□ 0.74
RoraP51448 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RoraP51448 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.64■□□□□ 0.73
RoraP51448 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RoraP51448 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RoraP51448 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
RoraP51448 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RoraP51448 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RoraP51448 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RoraP51448 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RoraP51448 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.63■□□□□ 0.73
RoraP51448 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms