Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Hnf4aP49698 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.22■□□□□ 0.83
Hnf4aP49698 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hnf4aP49698 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.22■□□□□ 0.83
Hnf4aP49698 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hnf4aP49698 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Hnf4aP49698 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hnf4aP49698 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hnf4aP49698 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hnf4aP49698 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hnf4aP49698 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.21■□□□□ 0.83
Hnf4aP49698 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hnf4aP49698 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.21■□□□□ 0.83
Hnf4aP49698 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.21■□□□□ 0.83
Hnf4aP49698 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hnf4aP49698 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hnf4aP49698 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hnf4aP49698 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Hnf4aP49698 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Hnf4aP49698 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
Hnf4aP49698 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hnf4aP49698 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hnf4aP49698 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Hnf4aP49698 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hnf4aP49698 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hnf4aP49698 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Hnf4aP49698 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hnf4aP49698 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.19■□□□□ 0.82
Hnf4aP49698 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hnf4aP49698 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hnf4aP49698 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hnf4aP49698 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hnf4aP49698 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hnf4aP49698 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hnf4aP49698 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hnf4aP49698 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hnf4aP49698 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hnf4aP49698 Gm5921-201ENSMUST00000075898 882 ntBASIC20.18■□□□□ 0.82
Hnf4aP49698 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hnf4aP49698 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Hnf4aP49698 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hnf4aP49698 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hnf4aP49698 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hnf4aP49698 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Hnf4aP49698 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hnf4aP49698 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hnf4aP49698 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.17■□□□□ 0.82
Hnf4aP49698 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.17■□□□□ 0.82
Hnf4aP49698 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.17■□□□□ 0.82
Hnf4aP49698 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hnf4aP49698 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Hnf4aP49698 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hnf4aP49698 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Hnf4aP49698 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hnf4aP49698 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Hnf4aP49698 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Hnf4aP49698 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hnf4aP49698 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hnf4aP49698 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hnf4aP49698 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hnf4aP49698 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hnf4aP49698 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hnf4aP49698 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hnf4aP49698 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Hnf4aP49698 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.14■□□□□ 0.81
Hnf4aP49698 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Hnf4aP49698 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.14■□□□□ 0.81
Hnf4aP49698 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hnf4aP49698 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hnf4aP49698 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Hnf4aP49698 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Hnf4aP49698 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hnf4aP49698 Gm43566-201ENSMUST00000196851 808 ntBASIC20.13■□□□□ 0.81
Hnf4aP49698 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hnf4aP49698 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Hnf4aP49698 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hnf4aP49698 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hnf4aP49698 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.12■□□□□ 0.81
Hnf4aP49698 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Hnf4aP49698 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hnf4aP49698 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hnf4aP49698 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hnf4aP49698 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.12■□□□□ 0.81
Hnf4aP49698 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hnf4aP49698 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Hnf4aP49698 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.12■□□□□ 0.81
Hnf4aP49698 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Hnf4aP49698 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Hnf4aP49698 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Hnf4aP49698 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hnf4aP49698 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hnf4aP49698 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hnf4aP49698 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
Hnf4aP49698 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hnf4aP49698 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hnf4aP49698 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.11■□□□□ 0.81
Hnf4aP49698 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Hnf4aP49698 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.11■□□□□ 0.81
Hnf4aP49698 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Hnf4aP49698 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms