Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
Sox18P43680 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sox18P43680 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sox18P43680 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Sox18P43680 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sox18P43680 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.1■□□□□ 0.81
Sox18P43680 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sox18P43680 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sox18P43680 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Sox18P43680 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Sox18P43680 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Sox18P43680 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.09■□□□□ 0.81
Sox18P43680 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
Sox18P43680 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sox18P43680 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.09■□□□□ 0.81
Sox18P43680 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.09■□□□□ 0.81
Sox18P43680 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sox18P43680 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sox18P43680 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.09■□□□□ 0.81
Sox18P43680 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sox18P43680 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sox18P43680 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Sox18P43680 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sox18P43680 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sox18P43680 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Sox18P43680 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sox18P43680 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sox18P43680 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Sox18P43680 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Sox18P43680 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Sox18P43680 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sox18P43680 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Sox18P43680 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sox18P43680 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sox18P43680 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Sox18P43680 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.06■□□□□ 0.8
Sox18P43680 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.06■□□□□ 0.8
Sox18P43680 Gm42569-201ENSMUST00000200539 472 ntBASIC20.06■□□□□ 0.8
Sox18P43680 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.06■□□□□ 0.8
Sox18P43680 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sox18P43680 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sox18P43680 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.06■□□□□ 0.8
Sox18P43680 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sox18P43680 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sox18P43680 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sox18P43680 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sox18P43680 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sox18P43680 Gm26571-201ENSMUST00000181399 666 ntBASIC20.05■□□□□ 0.8
Sox18P43680 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sox18P43680 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.05■□□□□ 0.8
Sox18P43680 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sox18P43680 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sox18P43680 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sox18P43680 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sox18P43680 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sox18P43680 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.04■□□□□ 0.8
Sox18P43680 Gm9870-201ENSMUST00000063874 645 ntBASIC20.04■□□□□ 0.8
Sox18P43680 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sox18P43680 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sox18P43680 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.04■□□□□ 0.8
Sox18P43680 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sox18P43680 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sox18P43680 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sox18P43680 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sox18P43680 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sox18P43680 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.03■□□□□ 0.8
Sox18P43680 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.03■□□□□ 0.8
Sox18P43680 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.03■□□□□ 0.8
Sox18P43680 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sox18P43680 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.03■□□□□ 0.8
Sox18P43680 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sox18P43680 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sox18P43680 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.03■□□□□ 0.8
Sox18P43680 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Sox18P43680 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Sox18P43680 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sox18P43680 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.02■□□□□ 0.8
Sox18P43680 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Sox18P43680 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Sox18P43680 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Sox18P43680 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Sox18P43680 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sox18P43680 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sox18P43680 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Sox18P43680 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sox18P43680 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Sox18P43680 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sox18P43680 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sox18P43680 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sox18P43680 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sox18P43680 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sox18P43680 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sox18P43680 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sox18P43680 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20■□□□□ 0.79
Sox18P43680 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sox18P43680 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20■□□□□ 0.79
Sox18P43680 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sox18P43680 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sox18P43680 Gm43173-201ENSMUST00000202246 593 ntBASIC20■□□□□ 0.79
Sox18P43680 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms