Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Abca1P41233 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.26■□□□□ 0.35
Abca1P41233 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Abca1P41233 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Abca1P41233 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Abca1P41233 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Abca1P41233 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Abca1P41233 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.25■□□□□ 0.35
Abca1P41233 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Abca1P41233 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Abca1P41233 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Abca1P41233 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Abca1P41233 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.24■□□□□ 0.35
Abca1P41233 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Abca1P41233 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Abca1P41233 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.24■□□□□ 0.35
Abca1P41233 Gm18284-201ENSMUST00000172604 624 ntBASIC17.24■□□□□ 0.35
Abca1P41233 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Abca1P41233 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Abca1P41233 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Abca1P41233 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Abca1P41233 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Abca1P41233 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Abca1P41233 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Abca1P41233 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
Abca1P41233 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Abca1P41233 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Abca1P41233 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
Abca1P41233 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Abca1P41233 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Abca1P41233 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Abca1P41233 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.23■□□□□ 0.35
Abca1P41233 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Abca1P41233 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Abca1P41233 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Abca1P41233 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Abca1P41233 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Abca1P41233 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Abca1P41233 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abca1P41233 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.22■□□□□ 0.35
Abca1P41233 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.22■□□□□ 0.35
Abca1P41233 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abca1P41233 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.22■□□□□ 0.35
Abca1P41233 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abca1P41233 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.22■□□□□ 0.35
Abca1P41233 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abca1P41233 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abca1P41233 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abca1P41233 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abca1P41233 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Abca1P41233 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Abca1P41233 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Abca1P41233 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abca1P41233 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abca1P41233 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Abca1P41233 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abca1P41233 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abca1P41233 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Abca1P41233 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Abca1P41233 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Abca1P41233 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Abca1P41233 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.2■□□□□ 0.34
Abca1P41233 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Abca1P41233 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Abca1P41233 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Abca1P41233 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.19■□□□□ 0.34
Abca1P41233 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.19■□□□□ 0.34
Abca1P41233 Gm6139-201ENSMUST00000079261 882 ntBASIC17.19■□□□□ 0.34
Abca1P41233 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Abca1P41233 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Abca1P41233 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Abca1P41233 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Abca1P41233 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Abca1P41233 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Abca1P41233 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Abca1P41233 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.19■□□□□ 0.34
Abca1P41233 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Abca1P41233 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Abca1P41233 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Abca1P41233 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Abca1P41233 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Abca1P41233 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Abca1P41233 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Abca1P41233 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Abca1P41233 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.18■□□□□ 0.34
Abca1P41233 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.18■□□□□ 0.34
Abca1P41233 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Abca1P41233 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Abca1P41233 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Abca1P41233 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Abca1P41233 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Abca1P41233 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Abca1P41233 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Abca1P41233 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Abca1P41233 Gm8495-201ENSMUST00000188740 694 ntBASIC17.17■□□□□ 0.34
Abca1P41233 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Abca1P41233 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Abca1P41233 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Abca1P41233 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Abca1P41233 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 475.9 ms