Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkn1aP39689 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkn1aP39689 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkn1aP39689 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkn1aP39689 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdkn1aP39689 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdkn1aP39689 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdkn1aP39689 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdkn1aP39689 Gm9847-201ENSMUST00000052528 599 ntBASIC17.27■□□□□ 0.36
Cdkn1aP39689 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Cdkn1aP39689 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdkn1aP39689 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cdkn1aP39689 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdkn1aP39689 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdkn1aP39689 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cdkn1aP39689 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdkn1aP39689 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cdkn1aP39689 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdkn1aP39689 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cdkn1aP39689 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Cdkn1aP39689 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.26■□□□□ 0.35
Cdkn1aP39689 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.26■□□□□ 0.35
Cdkn1aP39689 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cdkn1aP39689 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cdkn1aP39689 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
Cdkn1aP39689 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.25■□□□□ 0.35
Cdkn1aP39689 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdkn1aP39689 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
Cdkn1aP39689 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cdkn1aP39689 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdkn1aP39689 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdkn1aP39689 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdkn1aP39689 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdkn1aP39689 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdkn1aP39689 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cdkn1aP39689 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdkn1aP39689 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdkn1aP39689 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdkn1aP39689 Gm13241-201ENSMUST00000094493 780 ntBASIC17.24■□□□□ 0.35
Cdkn1aP39689 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdkn1aP39689 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdkn1aP39689 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdkn1aP39689 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdkn1aP39689 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
Cdkn1aP39689 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.23■□□□□ 0.35
Cdkn1aP39689 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cdkn1aP39689 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.23■□□□□ 0.35
Cdkn1aP39689 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cdkn1aP39689 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cdkn1aP39689 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.23■□□□□ 0.35
Cdkn1aP39689 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cdkn1aP39689 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdkn1aP39689 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.23■□□□□ 0.35
Cdkn1aP39689 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cdkn1aP39689 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdkn1aP39689 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdkn1aP39689 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.22■□□□□ 0.35
Cdkn1aP39689 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.22■□□□□ 0.35
Cdkn1aP39689 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.22■□□□□ 0.35
Cdkn1aP39689 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
Cdkn1aP39689 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdkn1aP39689 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdkn1aP39689 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Cdkn1aP39689 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkn1aP39689 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkn1aP39689 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkn1aP39689 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.21■□□□□ 0.35
Cdkn1aP39689 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkn1aP39689 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkn1aP39689 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkn1aP39689 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cdkn1aP39689 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.2■□□□□ 0.34
Cdkn1aP39689 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkn1aP39689 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cdkn1aP39689 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkn1aP39689 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.2■□□□□ 0.34
Cdkn1aP39689 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.2■□□□□ 0.34
Cdkn1aP39689 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkn1aP39689 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkn1aP39689 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.2■□□□□ 0.34
Cdkn1aP39689 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkn1aP39689 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cdkn1aP39689 Gm12922-201ENSMUST00000120626 809 ntBASIC17.19■□□□□ 0.34
Cdkn1aP39689 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.19■□□□□ 0.34
Cdkn1aP39689 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkn1aP39689 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkn1aP39689 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkn1aP39689 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkn1aP39689 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkn1aP39689 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkn1aP39689 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkn1aP39689 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cdkn1aP39689 Gm15039-201ENSMUST00000118914 875 ntBASIC17.18■□□□□ 0.34
Cdkn1aP39689 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.18■□□□□ 0.34
Cdkn1aP39689 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdkn1aP39689 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.18■□□□□ 0.34
Cdkn1aP39689 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cdkn1aP39689 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdkn1aP39689 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdkn1aP39689 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms