Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Foxa1P35582 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Foxa1P35582 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.37■□□□□ 0.69
Foxa1P35582 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Foxa1P35582 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Foxa1P35582 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.36■□□□□ 0.69
Foxa1P35582 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.36■□□□□ 0.69
Foxa1P35582 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.36■□□□□ 0.69
Foxa1P35582 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Foxa1P35582 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Foxa1P35582 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Foxa1P35582 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Foxa1P35582 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Foxa1P35582 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxa1P35582 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxa1P35582 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxa1P35582 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.35■□□□□ 0.69
Foxa1P35582 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxa1P35582 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxa1P35582 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxa1P35582 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxa1P35582 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxa1P35582 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.34■□□□□ 0.69
Foxa1P35582 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxa1P35582 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxa1P35582 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Foxa1P35582 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxa1P35582 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.34■□□□□ 0.69
Foxa1P35582 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Foxa1P35582 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxa1P35582 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.34■□□□□ 0.69
Foxa1P35582 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxa1P35582 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
Foxa1P35582 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Foxa1P35582 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.33■□□□□ 0.69
Foxa1P35582 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.33■□□□□ 0.69
Foxa1P35582 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Foxa1P35582 Gm10399-202ENSMUST00000202768 748 ntBASIC19.33■□□□□ 0.68
Foxa1P35582 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Foxa1P35582 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxa1P35582 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.32■□□□□ 0.68
Foxa1P35582 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxa1P35582 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.32■□□□□ 0.68
Foxa1P35582 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxa1P35582 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxa1P35582 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxa1P35582 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.31■□□□□ 0.68
Foxa1P35582 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.31■□□□□ 0.68
Foxa1P35582 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.31■□□□□ 0.68
Foxa1P35582 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxa1P35582 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxa1P35582 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Foxa1P35582 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxa1P35582 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxa1P35582 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxa1P35582 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Foxa1P35582 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.3■□□□□ 0.68
Foxa1P35582 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Foxa1P35582 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Foxa1P35582 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxa1P35582 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
Foxa1P35582 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxa1P35582 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.29■□□□□ 0.68
Foxa1P35582 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxa1P35582 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxa1P35582 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxa1P35582 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.29■□□□□ 0.68
Foxa1P35582 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxa1P35582 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxa1P35582 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxa1P35582 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxa1P35582 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Foxa1P35582 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.28■□□□□ 0.68
Foxa1P35582 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.28■□□□□ 0.68
Foxa1P35582 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxa1P35582 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Foxa1P35582 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Foxa1P35582 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.27■□□□□ 0.68
Foxa1P35582 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Foxa1P35582 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.27■□□□□ 0.68
Foxa1P35582 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.27■□□□□ 0.68
Foxa1P35582 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Foxa1P35582 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Foxa1P35582 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Foxa1P35582 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Foxa1P35582 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Foxa1P35582 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Foxa1P35582 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Foxa1P35582 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Foxa1P35582 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Foxa1P35582 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.26■□□□□ 0.67
Foxa1P35582 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Foxa1P35582 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Foxa1P35582 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Foxa1P35582 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Foxa1P35582 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Foxa1P35582 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Foxa1P35582 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
Foxa1P35582 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Foxa1P35582 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms