Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.33■□□□□ 0.68
Thbs1P35441 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Thbs1P35441 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Thbs1P35441 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Thbs1P35441 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.32■□□□□ 0.68
Thbs1P35441 Gm45444-201ENSMUST00000211394 898 ntBASIC19.32■□□□□ 0.68
Thbs1P35441 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Thbs1P35441 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Thbs1P35441 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Thbs1P35441 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Thbs1P35441 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.32■□□□□ 0.68
Thbs1P35441 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Thbs1P35441 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Thbs1P35441 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Thbs1P35441 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Thbs1P35441 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Thbs1P35441 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.31■□□□□ 0.68
Thbs1P35441 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.31■□□□□ 0.68
Thbs1P35441 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Thbs1P35441 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Thbs1P35441 Gm5921-201ENSMUST00000075898 882 ntBASIC19.31■□□□□ 0.68
Thbs1P35441 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.31■□□□□ 0.68
Thbs1P35441 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.31■□□□□ 0.68
Thbs1P35441 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Thbs1P35441 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Thbs1P35441 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Thbs1P35441 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Thbs1P35441 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Thbs1P35441 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Thbs1P35441 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.3■□□□□ 0.68
Thbs1P35441 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Thbs1P35441 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Thbs1P35441 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Thbs1P35441 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.29■□□□□ 0.68
Thbs1P35441 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.29■□□□□ 0.68
Thbs1P35441 Gm5812-201ENSMUST00000061073 957 ntBASIC19.29■□□□□ 0.68
Thbs1P35441 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.29■□□□□ 0.68
Thbs1P35441 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Thbs1P35441 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Thbs1P35441 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Thbs1P35441 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Thbs1P35441 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Thbs1P35441 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.28■□□□□ 0.68
Thbs1P35441 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Thbs1P35441 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Thbs1P35441 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Thbs1P35441 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Thbs1P35441 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Thbs1P35441 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Thbs1P35441 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Thbs1P35441 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Thbs1P35441 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Thbs1P35441 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Thbs1P35441 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Thbs1P35441 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Thbs1P35441 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Thbs1P35441 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Thbs1P35441 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Thbs1P35441 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Thbs1P35441 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Thbs1P35441 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Thbs1P35441 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Thbs1P35441 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Thbs1P35441 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Thbs1P35441 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Thbs1P35441 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Thbs1P35441 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Thbs1P35441 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Thbs1P35441 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Thbs1P35441 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.25■□□□□ 0.67
Thbs1P35441 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Thbs1P35441 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Thbs1P35441 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Thbs1P35441 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Thbs1P35441 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Thbs1P35441 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Thbs1P35441 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Thbs1P35441 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Thbs1P35441 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Thbs1P35441 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Thbs1P35441 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Thbs1P35441 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Thbs1P35441 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Thbs1P35441 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Thbs1P35441 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Thbs1P35441 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Thbs1P35441 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Thbs1P35441 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Thbs1P35441 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Thbs1P35441 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Thbs1P35441 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Thbs1P35441 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Thbs1P35441 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Thbs1P35441 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Thbs1P35441 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Thbs1P35441 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Thbs1P35441 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Thbs1P35441 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Thbs1P35441 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Thbs1P35441 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms