Protein–RNA interactions for Protein: P27659

Rpl3, 60S ribosomal protein L3, mousemouse

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl3P27659 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpl3P27659 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Rpl3P27659 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.86■□□□□ 0.77
Rpl3P27659 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpl3P27659 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpl3P27659 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rpl3P27659 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpl3P27659 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Rpl3P27659 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpl3P27659 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.85■□□□□ 0.77
Rpl3P27659 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Rpl3P27659 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpl3P27659 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rpl3P27659 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpl3P27659 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Rpl3P27659 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rpl3P27659 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpl3P27659 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpl3P27659 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rpl3P27659 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rpl3P27659 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.84■□□□□ 0.77
Rpl3P27659 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Rpl3P27659 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rpl3P27659 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpl3P27659 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpl3P27659 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.84■□□□□ 0.77
Rpl3P27659 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.83■□□□□ 0.77
Rpl3P27659 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rpl3P27659 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rpl3P27659 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rpl3P27659 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Rpl3P27659 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Rpl3P27659 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpl3P27659 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpl3P27659 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.82■□□□□ 0.76
Rpl3P27659 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.82■□□□□ 0.76
Rpl3P27659 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.82■□□□□ 0.76
Rpl3P27659 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rpl3P27659 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.82■□□□□ 0.76
Rpl3P27659 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpl3P27659 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpl3P27659 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpl3P27659 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
Rpl3P27659 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpl3P27659 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpl3P27659 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Rpl3P27659 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpl3P27659 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpl3P27659 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.79■□□□□ 0.76
Rpl3P27659 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpl3P27659 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpl3P27659 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpl3P27659 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.79■□□□□ 0.76
Rpl3P27659 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpl3P27659 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Rpl3P27659 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rpl3P27659 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.78■□□□□ 0.76
Rpl3P27659 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpl3P27659 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.78■□□□□ 0.76
Rpl3P27659 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpl3P27659 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rpl3P27659 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rpl3P27659 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rpl3P27659 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rpl3P27659 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rpl3P27659 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rpl3P27659 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rpl3P27659 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.77■□□□□ 0.75
Rpl3P27659 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Rpl3P27659 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.77■□□□□ 0.75
Rpl3P27659 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpl3P27659 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
Rpl3P27659 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rpl3P27659 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpl3P27659 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rpl3P27659 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.76■□□□□ 0.75
Rpl3P27659 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpl3P27659 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rpl3P27659 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.76■□□□□ 0.75
Rpl3P27659 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpl3P27659 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.76■□□□□ 0.75
Rpl3P27659 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpl3P27659 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpl3P27659 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpl3P27659 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rpl3P27659 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.75■□□□□ 0.75
Rpl3P27659 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpl3P27659 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rpl3P27659 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Rpl3P27659 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rpl3P27659 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpl3P27659 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpl3P27659 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpl3P27659 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpl3P27659 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Rpl3P27659 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpl3P27659 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpl3P27659 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpl3P27659 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rpl3P27659 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms