Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col8a2P25318 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col8a2P25318 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col8a2P25318 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col8a2P25318 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col8a2P25318 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col8a2P25318 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col8a2P25318 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col8a2P25318 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col8a2P25318 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col8a2P25318 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
Col8a2P25318 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col8a2P25318 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Col8a2P25318 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.52■□□□□ 0.4
Col8a2P25318 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col8a2P25318 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col8a2P25318 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Col8a2P25318 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.52■□□□□ 0.39
Col8a2P25318 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col8a2P25318 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col8a2P25318 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Col8a2P25318 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col8a2P25318 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.5■□□□□ 0.39
Col8a2P25318 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col8a2P25318 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col8a2P25318 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.5■□□□□ 0.39
Col8a2P25318 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col8a2P25318 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col8a2P25318 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col8a2P25318 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.5■□□□□ 0.39
Col8a2P25318 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.5■□□□□ 0.39
Col8a2P25318 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col8a2P25318 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col8a2P25318 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Col8a2P25318 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col8a2P25318 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col8a2P25318 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col8a2P25318 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Col8a2P25318 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Col8a2P25318 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col8a2P25318 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col8a2P25318 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.48■□□□□ 0.39
Col8a2P25318 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col8a2P25318 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.48■□□□□ 0.39
Col8a2P25318 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col8a2P25318 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col8a2P25318 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col8a2P25318 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col8a2P25318 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col8a2P25318 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.47■□□□□ 0.39
Col8a2P25318 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.47■□□□□ 0.39
Col8a2P25318 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Col8a2P25318 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.47■□□□□ 0.39
Col8a2P25318 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col8a2P25318 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.47■□□□□ 0.39
Col8a2P25318 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col8a2P25318 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Col8a2P25318 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col8a2P25318 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Col8a2P25318 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Col8a2P25318 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.46■□□□□ 0.39
Col8a2P25318 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.46■□□□□ 0.39
Col8a2P25318 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col8a2P25318 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col8a2P25318 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.46■□□□□ 0.39
Col8a2P25318 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Col8a2P25318 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col8a2P25318 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col8a2P25318 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col8a2P25318 Gm21956-201ENSMUST00000179946 522 ntBASIC17.45■□□□□ 0.38
Col8a2P25318 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.45■□□□□ 0.38
Col8a2P25318 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col8a2P25318 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col8a2P25318 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col8a2P25318 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col8a2P25318 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col8a2P25318 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col8a2P25318 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.44■□□□□ 0.38
Col8a2P25318 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col8a2P25318 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Col8a2P25318 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col8a2P25318 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Col8a2P25318 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col8a2P25318 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Col8a2P25318 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col8a2P25318 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col8a2P25318 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col8a2P25318 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col8a2P25318 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.43■□□□□ 0.38
Col8a2P25318 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col8a2P25318 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col8a2P25318 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.43■□□□□ 0.38
Col8a2P25318 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.43■□□□□ 0.38
Col8a2P25318 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col8a2P25318 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col8a2P25318 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Col8a2P25318 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.42■□□□□ 0.38
Col8a2P25318 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col8a2P25318 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col8a2P25318 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms