Protein–RNA interactions for Protein: P07744

Krt4, Keratin, type II cytoskeletal 4, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt4P07744 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt4P07744 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Krt4P07744 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
Krt4P07744 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt4P07744 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt4P07744 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Krt4P07744 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt4P07744 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Krt4P07744 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt4P07744 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Krt4P07744 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Krt4P07744 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Krt4P07744 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
Krt4P07744 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Krt4P07744 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Krt4P07744 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Krt4P07744 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Krt4P07744 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Krt4P07744 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.73■□□□□ 0.91
Krt4P07744 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Krt4P07744 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Krt4P07744 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Krt4P07744 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Krt4P07744 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Krt4P07744 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
Krt4P07744 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Krt4P07744 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Krt4P07744 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Krt4P07744 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Krt4P07744 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Krt4P07744 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.71■□□□□ 0.91
Krt4P07744 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Krt4P07744 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Krt4P07744 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Krt4P07744 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.71■□□□□ 0.91
Krt4P07744 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Krt4P07744 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Krt4P07744 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
Krt4P07744 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Krt4P07744 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Krt4P07744 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.7■□□□□ 0.9
Krt4P07744 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Krt4P07744 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Krt4P07744 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Krt4P07744 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt4P07744 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt4P07744 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Krt4P07744 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt4P07744 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt4P07744 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Krt4P07744 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.69■□□□□ 0.9
Krt4P07744 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Krt4P07744 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt4P07744 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt4P07744 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt4P07744 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt4P07744 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Krt4P07744 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Krt4P07744 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.68■□□□□ 0.9
Krt4P07744 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Krt4P07744 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Krt4P07744 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Krt4P07744 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Krt4P07744 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.67■□□□□ 0.9
Krt4P07744 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Krt4P07744 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Krt4P07744 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Krt4P07744 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Krt4P07744 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Krt4P07744 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.66■□□□□ 0.9
Krt4P07744 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Krt4P07744 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Krt4P07744 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Krt4P07744 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Krt4P07744 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Krt4P07744 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Krt4P07744 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Krt4P07744 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Krt4P07744 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Krt4P07744 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.65■□□□□ 0.9
Krt4P07744 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.65■□□□□ 0.9
Krt4P07744 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Krt4P07744 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.65■□□□□ 0.9
Krt4P07744 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Krt4P07744 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Krt4P07744 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Krt4P07744 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Krt4P07744 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Krt4P07744 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Krt4P07744 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Krt4P07744 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Krt4P07744 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.64■□□□□ 0.89
Krt4P07744 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Krt4P07744 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Krt4P07744 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Krt4P07744 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Krt4P07744 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Krt4P07744 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Krt4P07744 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Krt4P07744 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms