Protein–RNA interactions for Protein: P04202

Tgfb1, Transforming growth factor beta-1, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb1P04202 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.38■□□□□ 0.69
Tgfb1P04202 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Tgfb1P04202 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.38■□□□□ 0.69
Tgfb1P04202 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tgfb1P04202 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.38■□□□□ 0.69
Tgfb1P04202 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tgfb1P04202 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tgfb1P04202 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tgfb1P04202 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tgfb1P04202 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tgfb1P04202 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.37■□□□□ 0.69
Tgfb1P04202 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
Tgfb1P04202 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tgfb1P04202 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tgfb1P04202 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Tgfb1P04202 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tgfb1P04202 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tgfb1P04202 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tgfb1P04202 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.36■□□□□ 0.69
Tgfb1P04202 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tgfb1P04202 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.36■□□□□ 0.69
Tgfb1P04202 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tgfb1P04202 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Tgfb1P04202 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tgfb1P04202 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tgfb1P04202 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tgfb1P04202 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tgfb1P04202 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tgfb1P04202 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tgfb1P04202 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.35■□□□□ 0.69
Tgfb1P04202 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tgfb1P04202 Gm45444-201ENSMUST00000211394 898 ntBASIC19.35■□□□□ 0.69
Tgfb1P04202 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Tgfb1P04202 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tgfb1P04202 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tgfb1P04202 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tgfb1P04202 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tgfb1P04202 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tgfb1P04202 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.34■□□□□ 0.69
Tgfb1P04202 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.34■□□□□ 0.69
Tgfb1P04202 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.34■□□□□ 0.69
Tgfb1P04202 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tgfb1P04202 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Tgfb1P04202 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tgfb1P04202 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Tgfb1P04202 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tgfb1P04202 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tgfb1P04202 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tgfb1P04202 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tgfb1P04202 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tgfb1P04202 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tgfb1P04202 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Tgfb1P04202 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tgfb1P04202 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tgfb1P04202 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Tgfb1P04202 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tgfb1P04202 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tgfb1P04202 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tgfb1P04202 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tgfb1P04202 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.31■□□□□ 0.68
Tgfb1P04202 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tgfb1P04202 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tgfb1P04202 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.31■□□□□ 0.68
Tgfb1P04202 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.31■□□□□ 0.68
Tgfb1P04202 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tgfb1P04202 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tgfb1P04202 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tgfb1P04202 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tgfb1P04202 Gm5921-201ENSMUST00000075898 882 ntBASIC19.3■□□□□ 0.68
Tgfb1P04202 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tgfb1P04202 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tgfb1P04202 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tgfb1P04202 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.29■□□□□ 0.68
Tgfb1P04202 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tgfb1P04202 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tgfb1P04202 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tgfb1P04202 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tgfb1P04202 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tgfb1P04202 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Tgfb1P04202 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.29■□□□□ 0.68
Tgfb1P04202 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.29■□□□□ 0.68
Tgfb1P04202 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tgfb1P04202 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tgfb1P04202 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tgfb1P04202 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tgfb1P04202 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Tgfb1P04202 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Tgfb1P04202 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tgfb1P04202 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tgfb1P04202 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tgfb1P04202 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tgfb1P04202 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tgfb1P04202 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tgfb1P04202 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tgfb1P04202 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tgfb1P04202 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tgfb1P04202 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tgfb1P04202 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.27■□□□□ 0.68
Tgfb1P04202 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Tgfb1P04202 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms