Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Hoxa3P02831 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hoxa3P02831 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.48■□□□□ 0.39
Hoxa3P02831 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hoxa3P02831 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hoxa3P02831 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hoxa3P02831 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hoxa3P02831 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hoxa3P02831 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxa3P02831 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Hoxa3P02831 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxa3P02831 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.47■□□□□ 0.39
Hoxa3P02831 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxa3P02831 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxa3P02831 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxa3P02831 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxa3P02831 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.46■□□□□ 0.39
Hoxa3P02831 Gm10399-202ENSMUST00000202768 748 ntBASIC17.46■□□□□ 0.39
Hoxa3P02831 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxa3P02831 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxa3P02831 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Hoxa3P02831 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxa3P02831 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxa3P02831 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxa3P02831 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxa3P02831 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxa3P02831 Gm22238-201ENSMUST00000175222 88 ntBASIC17.45■□□□□ 0.38
Hoxa3P02831 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxa3P02831 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxa3P02831 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxa3P02831 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxa3P02831 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxa3P02831 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxa3P02831 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxa3P02831 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Hoxa3P02831 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Hoxa3P02831 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxa3P02831 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxa3P02831 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxa3P02831 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Hoxa3P02831 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxa3P02831 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxa3P02831 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxa3P02831 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxa3P02831 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.43■□□□□ 0.38
Hoxa3P02831 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.43■□□□□ 0.38
Hoxa3P02831 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Hoxa3P02831 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxa3P02831 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxa3P02831 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxa3P02831 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Hoxa3P02831 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxa3P02831 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxa3P02831 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxa3P02831 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxa3P02831 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxa3P02831 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxa3P02831 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.42■□□□□ 0.38
Hoxa3P02831 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxa3P02831 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.42■□□□□ 0.38
Hoxa3P02831 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxa3P02831 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxa3P02831 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Hoxa3P02831 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxa3P02831 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxa3P02831 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxa3P02831 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxa3P02831 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxa3P02831 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxa3P02831 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.41■□□□□ 0.38
Hoxa3P02831 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Hoxa3P02831 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxa3P02831 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxa3P02831 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxa3P02831 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxa3P02831 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxa3P02831 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxa3P02831 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxa3P02831 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxa3P02831 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxa3P02831 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxa3P02831 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Hoxa3P02831 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.4■□□□□ 0.38
Hoxa3P02831 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxa3P02831 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxa3P02831 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Hoxa3P02831 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Hoxa3P02831 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Hoxa3P02831 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Hoxa3P02831 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxa3P02831 Gm15039-201ENSMUST00000118914 875 ntBASIC17.39■□□□□ 0.37
Hoxa3P02831 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Hoxa3P02831 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.39■□□□□ 0.37
Hoxa3P02831 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxa3P02831 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxa3P02831 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxa3P02831 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxa3P02831 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Hoxa3P02831 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxa3P02831 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms