Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.78■□□□□ 0.76
Matn4O89029 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Matn4O89029 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Matn4O89029 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Matn4O89029 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Matn4O89029 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Matn4O89029 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Matn4O89029 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Matn4O89029 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Matn4O89029 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Matn4O89029 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Matn4O89029 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Matn4O89029 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Matn4O89029 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.77■□□□□ 0.76
Matn4O89029 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.77■□□□□ 0.76
Matn4O89029 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Matn4O89029 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Matn4O89029 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Matn4O89029 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Matn4O89029 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Matn4O89029 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Matn4O89029 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Matn4O89029 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Matn4O89029 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Matn4O89029 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Matn4O89029 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.76■□□□□ 0.75
Matn4O89029 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Matn4O89029 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Matn4O89029 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Matn4O89029 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.75■□□□□ 0.75
Matn4O89029 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Matn4O89029 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Matn4O89029 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Matn4O89029 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Matn4O89029 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Matn4O89029 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Matn4O89029 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Matn4O89029 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Matn4O89029 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Matn4O89029 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Matn4O89029 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Matn4O89029 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Matn4O89029 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.74■□□□□ 0.75
Matn4O89029 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Matn4O89029 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Matn4O89029 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Matn4O89029 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Matn4O89029 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Matn4O89029 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Matn4O89029 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.73■□□□□ 0.75
Matn4O89029 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Matn4O89029 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Matn4O89029 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Matn4O89029 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Matn4O89029 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Matn4O89029 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Matn4O89029 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Matn4O89029 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Matn4O89029 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Matn4O89029 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Matn4O89029 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Matn4O89029 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Matn4O89029 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Matn4O89029 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Matn4O89029 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.72■□□□□ 0.75
Matn4O89029 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Matn4O89029 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Matn4O89029 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Matn4O89029 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Matn4O89029 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.71■□□□□ 0.75
Matn4O89029 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Matn4O89029 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Matn4O89029 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Matn4O89029 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.7■□□□□ 0.74
Matn4O89029 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Matn4O89029 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Matn4O89029 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Matn4O89029 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Matn4O89029 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Matn4O89029 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Matn4O89029 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Matn4O89029 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Matn4O89029 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Matn4O89029 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Matn4O89029 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Matn4O89029 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Matn4O89029 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Matn4O89029 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Matn4O89029 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Matn4O89029 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Matn4O89029 Gm14523-201ENSMUST00000117260 558 ntBASIC19.69■□□□□ 0.74
Matn4O89029 Gm27502-201ENSMUST00000183495 199 ntBASIC19.69■□□□□ 0.74
Matn4O89029 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Matn4O89029 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Matn4O89029 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Matn4O89029 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.69■□□□□ 0.74
Matn4O89029 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Matn4O89029 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Matn4O89029 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Matn4O89029 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms