Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Abcd4O89016 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.81■□□□□ 0.6
Abcd4O89016 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Abcd4O89016 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.81■□□□□ 0.6
Abcd4O89016 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Abcd4O89016 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Abcd4O89016 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.81■□□□□ 0.6
Abcd4O89016 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Abcd4O89016 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Abcd4O89016 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abcd4O89016 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abcd4O89016 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Abcd4O89016 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Abcd4O89016 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abcd4O89016 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abcd4O89016 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abcd4O89016 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.8■□□□□ 0.6
Abcd4O89016 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Abcd4O89016 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Abcd4O89016 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Abcd4O89016 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Abcd4O89016 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.79■□□□□ 0.6
Abcd4O89016 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.79■□□□□ 0.6
Abcd4O89016 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Abcd4O89016 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abcd4O89016 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abcd4O89016 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Abcd4O89016 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abcd4O89016 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.78■□□□□ 0.6
Abcd4O89016 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abcd4O89016 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abcd4O89016 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abcd4O89016 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abcd4O89016 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Abcd4O89016 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Abcd4O89016 Gm22238-201ENSMUST00000175222 88 ntBASIC18.77■□□□□ 0.6
Abcd4O89016 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.77■□□□□ 0.6
Abcd4O89016 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Abcd4O89016 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Abcd4O89016 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Abcd4O89016 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Abcd4O89016 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Abcd4O89016 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Abcd4O89016 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Abcd4O89016 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Abcd4O89016 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.76■□□□□ 0.59
Abcd4O89016 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Abcd4O89016 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Abcd4O89016 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Abcd4O89016 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Abcd4O89016 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Abcd4O89016 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Abcd4O89016 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Abcd4O89016 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Abcd4O89016 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Abcd4O89016 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Abcd4O89016 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Abcd4O89016 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Abcd4O89016 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Abcd4O89016 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Abcd4O89016 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Abcd4O89016 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Abcd4O89016 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Abcd4O89016 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Abcd4O89016 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Abcd4O89016 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Abcd4O89016 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Abcd4O89016 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Abcd4O89016 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Abcd4O89016 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Abcd4O89016 Gm13241-201ENSMUST00000094493 780 ntBASIC18.74■□□□□ 0.59
Abcd4O89016 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Abcd4O89016 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Abcd4O89016 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Abcd4O89016 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Abcd4O89016 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Abcd4O89016 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Abcd4O89016 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Abcd4O89016 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Abcd4O89016 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Abcd4O89016 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.73■□□□□ 0.59
Abcd4O89016 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.73■□□□□ 0.59
Abcd4O89016 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Abcd4O89016 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.73■□□□□ 0.59
Abcd4O89016 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.73■□□□□ 0.59
Abcd4O89016 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Abcd4O89016 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Abcd4O89016 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Abcd4O89016 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Abcd4O89016 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.73■□□□□ 0.59
Abcd4O89016 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Abcd4O89016 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Abcd4O89016 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Abcd4O89016 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Abcd4O89016 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Abcd4O89016 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Abcd4O89016 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Abcd4O89016 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.72■□□□□ 0.59
Abcd4O89016 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Abcd4O89016 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms