Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Hcn1O88704 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
Hcn1O88704 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hcn1O88704 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hcn1O88704 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hcn1O88704 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hcn1O88704 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Hcn1O88704 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hcn1O88704 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Hcn1O88704 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Hcn1O88704 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.89■□□□□ 0.77
Hcn1O88704 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.89■□□□□ 0.77
Hcn1O88704 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.89■□□□□ 0.77
Hcn1O88704 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hcn1O88704 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.88■□□□□ 0.77
Hcn1O88704 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
Hcn1O88704 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hcn1O88704 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hcn1O88704 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hcn1O88704 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hcn1O88704 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hcn1O88704 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hcn1O88704 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hcn1O88704 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Hcn1O88704 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hcn1O88704 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
Hcn1O88704 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hcn1O88704 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Hcn1O88704 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Hcn1O88704 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.87■□□□□ 0.77
Hcn1O88704 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hcn1O88704 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hcn1O88704 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Hcn1O88704 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hcn1O88704 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hcn1O88704 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hcn1O88704 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Hcn1O88704 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.86■□□□□ 0.77
Hcn1O88704 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hcn1O88704 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hcn1O88704 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hcn1O88704 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hcn1O88704 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Hcn1O88704 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.85■□□□□ 0.77
Hcn1O88704 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.85■□□□□ 0.77
Hcn1O88704 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Hcn1O88704 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.85■□□□□ 0.77
Hcn1O88704 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.85■□□□□ 0.77
Hcn1O88704 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.85■□□□□ 0.77
Hcn1O88704 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hcn1O88704 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hcn1O88704 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hcn1O88704 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hcn1O88704 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.84■□□□□ 0.77
Hcn1O88704 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hcn1O88704 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hcn1O88704 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hcn1O88704 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.84■□□□□ 0.77
Hcn1O88704 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hcn1O88704 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.84■□□□□ 0.77
Hcn1O88704 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hcn1O88704 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hcn1O88704 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hcn1O88704 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hcn1O88704 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Hcn1O88704 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hcn1O88704 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hcn1O88704 Gm15546-201ENSMUST00000122095 826 ntBASIC19.82■□□□□ 0.76
Hcn1O88704 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Hcn1O88704 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.82■□□□□ 0.76
Hcn1O88704 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hcn1O88704 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Hcn1O88704 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hcn1O88704 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.82■□□□□ 0.76
Hcn1O88704 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hcn1O88704 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hcn1O88704 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hcn1O88704 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hcn1O88704 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hcn1O88704 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hcn1O88704 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hcn1O88704 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hcn1O88704 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hcn1O88704 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hcn1O88704 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hcn1O88704 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Hcn1O88704 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Hcn1O88704 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hcn1O88704 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hcn1O88704 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hcn1O88704 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hcn1O88704 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hcn1O88704 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Hcn1O88704 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hcn1O88704 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hcn1O88704 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hcn1O88704 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hcn1O88704 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Hcn1O88704 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hcn1O88704 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms