Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfrsf17O88472 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Tnfrsf17O88472 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.64■□□□□ 0.73
Tnfrsf17O88472 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.64■□□□□ 0.73
Tnfrsf17O88472 Spcs1-204ENSMUST00000226782 949 ntBASIC19.64■□□□□ 0.73
Tnfrsf17O88472 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf17O88472 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf17O88472 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf17O88472 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf17O88472 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf17O88472 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf17O88472 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Tnfrsf17O88472 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfrsf17O88472 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfrsf17O88472 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Tnfrsf17O88472 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Tnfrsf17O88472 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfrsf17O88472 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.63■□□□□ 0.73
Tnfrsf17O88472 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Tnfrsf17O88472 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfrsf17O88472 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfrsf17O88472 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.62■□□□□ 0.73
Tnfrsf17O88472 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.62■□□□□ 0.73
Tnfrsf17O88472 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfrsf17O88472 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Tnfrsf17O88472 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfrsf17O88472 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfrsf17O88472 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Tnfrsf17O88472 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfrsf17O88472 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.61■□□□□ 0.73
Tnfrsf17O88472 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.61■□□□□ 0.73
Tnfrsf17O88472 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfrsf17O88472 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Tnfrsf17O88472 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Tnfrsf17O88472 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfrsf17O88472 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfrsf17O88472 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfrsf17O88472 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.6■□□□□ 0.73
Tnfrsf17O88472 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfrsf17O88472 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfrsf17O88472 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Tnfrsf17O88472 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfrsf17O88472 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.6■□□□□ 0.73
Tnfrsf17O88472 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf17O88472 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf17O88472 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf17O88472 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf17O88472 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf17O88472 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.59■□□□□ 0.73
Tnfrsf17O88472 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf17O88472 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf17O88472 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf17O88472 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.59■□□□□ 0.73
Tnfrsf17O88472 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf17O88472 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf17O88472 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
Tnfrsf17O88472 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Tnfrsf17O88472 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tnfrsf17O88472 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tnfrsf17O88472 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tnfrsf17O88472 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.57■□□□□ 0.72
Tnfrsf17O88472 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.57■□□□□ 0.72
Tnfrsf17O88472 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Tnfrsf17O88472 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.57■□□□□ 0.72
Tnfrsf17O88472 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfrsf17O88472 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfrsf17O88472 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfrsf17O88472 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfrsf17O88472 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tnfrsf17O88472 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tnfrsf17O88472 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tnfrsf17O88472 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Tnfrsf17O88472 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tnfrsf17O88472 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tnfrsf17O88472 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tnfrsf17O88472 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.55■□□□□ 0.72
Tnfrsf17O88472 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf17O88472 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.55■□□□□ 0.72
Tnfrsf17O88472 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.55■□□□□ 0.72
Tnfrsf17O88472 Gm18671-201ENSMUST00000214826 683 ntBASIC19.55■□□□□ 0.72
Tnfrsf17O88472 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf17O88472 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf17O88472 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf17O88472 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.55■□□□□ 0.72
Tnfrsf17O88472 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf17O88472 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.54■□□□□ 0.72
Tnfrsf17O88472 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf17O88472 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf17O88472 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf17O88472 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf17O88472 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.54■□□□□ 0.72
Tnfrsf17O88472 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf17O88472 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf17O88472 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Tnfrsf17O88472 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf17O88472 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Tnfrsf17O88472 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.53■□□□□ 0.72
Tnfrsf17O88472 AV356131-201ENSMUST00000206201 750 ntBASIC19.53■□□□□ 0.72
Tnfrsf17O88472 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf17O88472 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms