Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Capns1O88456 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Capns1O88456 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.21■□□□□ 0.67
Capns1O88456 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Capns1O88456 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Capns1O88456 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Capns1O88456 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Capns1O88456 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Capns1O88456 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Capns1O88456 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Capns1O88456 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Capns1O88456 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.2■□□□□ 0.66
Capns1O88456 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Capns1O88456 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.2■□□□□ 0.66
Capns1O88456 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Capns1O88456 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
Capns1O88456 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Capns1O88456 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Capns1O88456 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Capns1O88456 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Capns1O88456 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Capns1O88456 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Capns1O88456 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Capns1O88456 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.18■□□□□ 0.66
Capns1O88456 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Capns1O88456 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Capns1O88456 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Capns1O88456 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Capns1O88456 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.18■□□□□ 0.66
Capns1O88456 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Capns1O88456 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Capns1O88456 Gm10420-201ENSMUST00000121713 882 ntBASIC19.18■□□□□ 0.66
Capns1O88456 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Capns1O88456 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Capns1O88456 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Capns1O88456 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Capns1O88456 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.17■□□□□ 0.66
Capns1O88456 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.17■□□□□ 0.66
Capns1O88456 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Capns1O88456 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Capns1O88456 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Capns1O88456 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Capns1O88456 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Capns1O88456 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Capns1O88456 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Capns1O88456 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Capns1O88456 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Capns1O88456 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Capns1O88456 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Capns1O88456 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.16■□□□□ 0.66
Capns1O88456 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Capns1O88456 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Capns1O88456 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Capns1O88456 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Capns1O88456 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Capns1O88456 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Capns1O88456 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Capns1O88456 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Capns1O88456 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Capns1O88456 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Capns1O88456 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.15■□□□□ 0.66
Capns1O88456 Gm15546-201ENSMUST00000122095 826 ntBASIC19.15■□□□□ 0.66
Capns1O88456 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.15■□□□□ 0.66
Capns1O88456 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Capns1O88456 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Capns1O88456 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Capns1O88456 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.14■□□□□ 0.66
Capns1O88456 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Capns1O88456 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Capns1O88456 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Capns1O88456 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Capns1O88456 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Capns1O88456 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Capns1O88456 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.13■□□□□ 0.65
Capns1O88456 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Capns1O88456 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Capns1O88456 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Capns1O88456 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Capns1O88456 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Capns1O88456 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Capns1O88456 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.12■□□□□ 0.65
Capns1O88456 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Capns1O88456 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Capns1O88456 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Capns1O88456 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Capns1O88456 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Capns1O88456 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Capns1O88456 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Capns1O88456 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.11■□□□□ 0.65
Capns1O88456 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Capns1O88456 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Capns1O88456 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Capns1O88456 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.11■□□□□ 0.65
Capns1O88456 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Capns1O88456 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Capns1O88456 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Capns1O88456 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Capns1O88456 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Capns1O88456 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Capns1O88456 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms