Protein–RNA interactions for Protein: O55242

Sigmar1, Sigma non-opioid intracellular receptor 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sigmar1O55242 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sigmar1O55242 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sigmar1O55242 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Sigmar1O55242 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sigmar1O55242 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sigmar1O55242 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.37□□□□□ -0.11
Sigmar1O55242 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sigmar1O55242 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sigmar1O55242 Gm26115-201ENSMUST00000175605 87 ntBASIC14.36□□□□□ -0.11
Sigmar1O55242 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Sigmar1O55242 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Sigmar1O55242 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Sigmar1O55242 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sigmar1O55242 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sigmar1O55242 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sigmar1O55242 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sigmar1O55242 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sigmar1O55242 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sigmar1O55242 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sigmar1O55242 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sigmar1O55242 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sigmar1O55242 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sigmar1O55242 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sigmar1O55242 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sigmar1O55242 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sigmar1O55242 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sigmar1O55242 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sigmar1O55242 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Sigmar1O55242 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sigmar1O55242 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sigmar1O55242 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sigmar1O55242 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sigmar1O55242 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sigmar1O55242 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sigmar1O55242 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sigmar1O55242 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sigmar1O55242 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sigmar1O55242 AC153962.1-201ENSMUST00000218530 1948 ntBASIC14.33□□□□□ -0.11
Sigmar1O55242 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sigmar1O55242 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sigmar1O55242 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sigmar1O55242 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sigmar1O55242 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sigmar1O55242 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sigmar1O55242 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sigmar1O55242 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Sigmar1O55242 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sigmar1O55242 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sigmar1O55242 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sigmar1O55242 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sigmar1O55242 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sigmar1O55242 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sigmar1O55242 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sigmar1O55242 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sigmar1O55242 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Sigmar1O55242 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sigmar1O55242 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sigmar1O55242 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sigmar1O55242 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sigmar1O55242 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sigmar1O55242 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sigmar1O55242 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Sigmar1O55242 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Sigmar1O55242 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sigmar1O55242 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sigmar1O55242 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sigmar1O55242 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sigmar1O55242 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.31□□□□□ -0.12
Sigmar1O55242 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC14.31□□□□□ -0.12
Sigmar1O55242 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
Sigmar1O55242 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sigmar1O55242 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Sigmar1O55242 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Sigmar1O55242 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sigmar1O55242 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sigmar1O55242 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sigmar1O55242 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC14.3□□□□□ -0.12
Sigmar1O55242 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.3□□□□□ -0.12
Sigmar1O55242 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sigmar1O55242 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sigmar1O55242 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Sigmar1O55242 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sigmar1O55242 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sigmar1O55242 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.29□□□□□ -0.12
Sigmar1O55242 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sigmar1O55242 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sigmar1O55242 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sigmar1O55242 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Sigmar1O55242 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sigmar1O55242 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sigmar1O55242 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sigmar1O55242 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Sigmar1O55242 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sigmar1O55242 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sigmar1O55242 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sigmar1O55242 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sigmar1O55242 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sigmar1O55242 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sigmar1O55242 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Sigmar1O55242 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms