Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.8■□□□□ 0.76
Rdh5O55240 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.8■□□□□ 0.76
Rdh5O55240 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rdh5O55240 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rdh5O55240 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Rdh5O55240 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rdh5O55240 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Rdh5O55240 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rdh5O55240 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rdh5O55240 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rdh5O55240 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Rdh5O55240 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Rdh5O55240 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rdh5O55240 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rdh5O55240 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rdh5O55240 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rdh5O55240 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.78■□□□□ 0.76
Rdh5O55240 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rdh5O55240 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rdh5O55240 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rdh5O55240 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.78■□□□□ 0.76
Rdh5O55240 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Rdh5O55240 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.78■□□□□ 0.76
Rdh5O55240 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rdh5O55240 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Rdh5O55240 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rdh5O55240 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Rdh5O55240 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Rdh5O55240 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
Rdh5O55240 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rdh5O55240 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rdh5O55240 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Rdh5O55240 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rdh5O55240 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rdh5O55240 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rdh5O55240 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rdh5O55240 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rdh5O55240 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rdh5O55240 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rdh5O55240 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rdh5O55240 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rdh5O55240 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rdh5O55240 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rdh5O55240 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rdh5O55240 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.75■□□□□ 0.75
Rdh5O55240 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.75■□□□□ 0.75
Rdh5O55240 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rdh5O55240 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rdh5O55240 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rdh5O55240 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Rdh5O55240 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rdh5O55240 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.74■□□□□ 0.75
Rdh5O55240 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rdh5O55240 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.74■□□□□ 0.75
Rdh5O55240 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rdh5O55240 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.74■□□□□ 0.75
Rdh5O55240 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rdh5O55240 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rdh5O55240 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rdh5O55240 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.73■□□□□ 0.75
Rdh5O55240 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Rdh5O55240 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.73■□□□□ 0.75
Rdh5O55240 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Rdh5O55240 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.73■□□□□ 0.75
Rdh5O55240 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Rdh5O55240 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rdh5O55240 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rdh5O55240 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rdh5O55240 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rdh5O55240 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rdh5O55240 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rdh5O55240 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rdh5O55240 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Rdh5O55240 Gm15820-201ENSMUST00000201566 728 ntBASIC19.71■□□□□ 0.75
Rdh5O55240 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.71■□□□□ 0.75
Rdh5O55240 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rdh5O55240 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.71■□□□□ 0.75
Rdh5O55240 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rdh5O55240 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rdh5O55240 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rdh5O55240 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rdh5O55240 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rdh5O55240 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rdh5O55240 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rdh5O55240 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.7■□□□□ 0.74
Rdh5O55240 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.7■□□□□ 0.74
Rdh5O55240 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rdh5O55240 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
Rdh5O55240 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rdh5O55240 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rdh5O55240 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rdh5O55240 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
Rdh5O55240 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rdh5O55240 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rdh5O55240 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rdh5O55240 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.69■□□□□ 0.74
Rdh5O55240 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rdh5O55240 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rdh5O55240 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rdh5O55240 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms