Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Pcdh12O55134 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.91■□□□□ 0.62
Pcdh12O55134 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh12O55134 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Pcdh12O55134 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Pcdh12O55134 Gm15820-201ENSMUST00000201566 728 ntBASIC18.91■□□□□ 0.62
Pcdh12O55134 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.91■□□□□ 0.62
Pcdh12O55134 Gm10232-201ENSMUST00000089221 720 ntBASIC18.91■□□□□ 0.62
Pcdh12O55134 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh12O55134 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Pcdh12O55134 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.91■□□□□ 0.62
Pcdh12O55134 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
Pcdh12O55134 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh12O55134 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Pcdh12O55134 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh12O55134 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh12O55134 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh12O55134 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh12O55134 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh12O55134 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.9■□□□□ 0.62
Pcdh12O55134 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Pcdh12O55134 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh12O55134 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Pcdh12O55134 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh12O55134 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdh12O55134 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh12O55134 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh12O55134 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh12O55134 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh12O55134 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh12O55134 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh12O55134 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.88■□□□□ 0.61
Pcdh12O55134 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh12O55134 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.88■□□□□ 0.61
Pcdh12O55134 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Pcdh12O55134 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Pcdh12O55134 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.88■□□□□ 0.61
Pcdh12O55134 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh12O55134 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh12O55134 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh12O55134 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh12O55134 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh12O55134 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh12O55134 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.87■□□□□ 0.61
Pcdh12O55134 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh12O55134 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh12O55134 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh12O55134 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh12O55134 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh12O55134 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh12O55134 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.86■□□□□ 0.61
Pcdh12O55134 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh12O55134 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh12O55134 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh12O55134 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh12O55134 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh12O55134 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.85■□□□□ 0.61
Pcdh12O55134 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh12O55134 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.85■□□□□ 0.61
Pcdh12O55134 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Pcdh12O55134 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh12O55134 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh12O55134 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh12O55134 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh12O55134 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh12O55134 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh12O55134 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.84■□□□□ 0.61
Pcdh12O55134 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh12O55134 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh12O55134 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh12O55134 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Pcdh12O55134 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.83■□□□□ 0.61
Pcdh12O55134 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh12O55134 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.83■□□□□ 0.6
Pcdh12O55134 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh12O55134 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh12O55134 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh12O55134 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh12O55134 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh12O55134 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh12O55134 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh12O55134 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh12O55134 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdh12O55134 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pcdh12O55134 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh12O55134 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh12O55134 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh12O55134 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh12O55134 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdh12O55134 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdh12O55134 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Pcdh12O55134 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh12O55134 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh12O55134 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Pcdh12O55134 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh12O55134 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh12O55134 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.81■□□□□ 0.6
Pcdh12O55134 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh12O55134 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh12O55134 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms