Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC23.33■■□□□ 1.33
Trdmt1O55055 Kdm3b-204ENSMUST00000224715 2032 ntBASIC23.33■■□□□ 1.32
Trdmt1O55055 Gm4430-201ENSMUST00000192413 1943 ntBASIC23.33■■□□□ 1.32
Trdmt1O55055 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
Trdmt1O55055 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Trdmt1O55055 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Trdmt1O55055 AC115037.1-201ENSMUST00000223391 2173 ntBASIC23.33■■□□□ 1.32
Trdmt1O55055 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trdmt1O55055 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Trdmt1O55055 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trdmt1O55055 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC23.32■■□□□ 1.32
Trdmt1O55055 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Trdmt1O55055 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC23.32■■□□□ 1.32
Trdmt1O55055 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trdmt1O55055 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Trdmt1O55055 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Trdmt1O55055 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Trdmt1O55055 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trdmt1O55055 Gm2011-201ENSMUST00000203124 1263 ntBASIC23.31■■□□□ 1.32
Trdmt1O55055 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trdmt1O55055 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Trdmt1O55055 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Trdmt1O55055 Gm10657-201ENSMUST00000193528 1031 ntBASIC23.3■■□□□ 1.32
Trdmt1O55055 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Trdmt1O55055 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Trdmt1O55055 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trdmt1O55055 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trdmt1O55055 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trdmt1O55055 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Trdmt1O55055 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
Trdmt1O55055 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC23.28■■□□□ 1.32
Trdmt1O55055 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Trdmt1O55055 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trdmt1O55055 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trdmt1O55055 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Trdmt1O55055 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trdmt1O55055 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC23.27■■□□□ 1.32
Trdmt1O55055 Mir7075-201ENSMUST00000184187 82 ntBASIC23.27■■□□□ 1.32
Trdmt1O55055 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Trdmt1O55055 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Trdmt1O55055 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trdmt1O55055 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Trdmt1O55055 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.31
Trdmt1O55055 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Trdmt1O55055 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.26■■□□□ 1.31
Trdmt1O55055 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Trdmt1O55055 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC23.26■■□□□ 1.31
Trdmt1O55055 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC23.26■■□□□ 1.31
Trdmt1O55055 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
Trdmt1O55055 Gm7143-201ENSMUST00000222811 859 ntBASIC23.26■■□□□ 1.31
Trdmt1O55055 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Trdmt1O55055 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Trdmt1O55055 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trdmt1O55055 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Trdmt1O55055 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trdmt1O55055 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Trdmt1O55055 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Trdmt1O55055 Gm8495-201ENSMUST00000188740 694 ntBASIC23.25■■□□□ 1.31
Trdmt1O55055 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Trdmt1O55055 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trdmt1O55055 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trdmt1O55055 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trdmt1O55055 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trdmt1O55055 Gm18284-201ENSMUST00000172604 624 ntBASIC23.24■■□□□ 1.31
Trdmt1O55055 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trdmt1O55055 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Trdmt1O55055 Flvcr1-202ENSMUST00000191946 1216 ntBASIC23.24■■□□□ 1.31
Trdmt1O55055 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
Trdmt1O55055 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trdmt1O55055 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Trdmt1O55055 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trdmt1O55055 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trdmt1O55055 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Trdmt1O55055 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
Trdmt1O55055 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC23.23■■□□□ 1.31
Trdmt1O55055 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trdmt1O55055 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trdmt1O55055 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trdmt1O55055 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Trdmt1O55055 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Trdmt1O55055 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trdmt1O55055 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trdmt1O55055 Slc35b2-207ENSMUST00000226086 850 ntBASIC23.22■■□□□ 1.31
Trdmt1O55055 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trdmt1O55055 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trdmt1O55055 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trdmt1O55055 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Trdmt1O55055 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
Trdmt1O55055 Gm8770-201ENSMUST00000121113 1109 ntBASIC23.21■■□□□ 1.31
Trdmt1O55055 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC23.21■■□□□ 1.31
Trdmt1O55055 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC23.21■■□□□ 1.31
Trdmt1O55055 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trdmt1O55055 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
Trdmt1O55055 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Trdmt1O55055 Gm21168-201ENSMUST00000199646 1096 ntBASIC23.21■■□□□ 1.31
Trdmt1O55055 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC23.21■■□□□ 1.31
Trdmt1O55055 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
Trdmt1O55055 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
Trdmt1O55055 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trdmt1O55055 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms