Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.33■■□□□ 1.17
Kcnu1O54982 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.17
Kcnu1O54982 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Kcnu1O54982 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Kcnu1O54982 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC22.33■■□□□ 1.16
Kcnu1O54982 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Kcnu1O54982 Gm43006-201ENSMUST00000197702 1602 ntBASIC22.32■■□□□ 1.16
Kcnu1O54982 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Kcnu1O54982 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Kcnu1O54982 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Kcnu1O54982 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Kcnu1O54982 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Kcnu1O54982 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Kcnu1O54982 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC22.31■■□□□ 1.16
Kcnu1O54982 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Kcnu1O54982 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Kcnu1O54982 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.31■■□□□ 1.16
Kcnu1O54982 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC22.31■■□□□ 1.16
Kcnu1O54982 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Kcnu1O54982 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Kcnu1O54982 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Kcnu1O54982 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Kcnu1O54982 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Kcnu1O54982 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
Kcnu1O54982 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Kcnu1O54982 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Kcnu1O54982 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.3■■□□□ 1.16
Kcnu1O54982 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Kcnu1O54982 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC22.3■■□□□ 1.16
Kcnu1O54982 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Kcnu1O54982 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Kcnu1O54982 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Kcnu1O54982 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
Kcnu1O54982 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Kcnu1O54982 Gm13238-201ENSMUST00000117655 780 ntBASIC22.29■■□□□ 1.16
Kcnu1O54982 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Kcnu1O54982 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Kcnu1O54982 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.29■■□□□ 1.16
Kcnu1O54982 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.29■■□□□ 1.16
Kcnu1O54982 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Kcnu1O54982 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Kcnu1O54982 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Kcnu1O54982 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Kcnu1O54982 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Kcnu1O54982 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Kcnu1O54982 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Kcnu1O54982 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Kcnu1O54982 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Kcnu1O54982 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Kcnu1O54982 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Kcnu1O54982 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Kcnu1O54982 Gm44949-201ENSMUST00000206423 1450 ntBASIC22.28■■□□□ 1.16
Kcnu1O54982 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC22.28■■□□□ 1.16
Kcnu1O54982 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Kcnu1O54982 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Kcnu1O54982 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Kcnu1O54982 Gm45444-201ENSMUST00000211394 898 ntBASIC22.27■■□□□ 1.16
Kcnu1O54982 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
Kcnu1O54982 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Kcnu1O54982 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Kcnu1O54982 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Kcnu1O54982 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Kcnu1O54982 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Kcnu1O54982 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Kcnu1O54982 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.26■■□□□ 1.15
Kcnu1O54982 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Kcnu1O54982 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.26■■□□□ 1.15
Kcnu1O54982 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Kcnu1O54982 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
Kcnu1O54982 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Kcnu1O54982 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Kcnu1O54982 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Kcnu1O54982 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC22.25■■□□□ 1.15
Kcnu1O54982 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.25■■□□□ 1.15
Kcnu1O54982 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Kcnu1O54982 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Kcnu1O54982 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Kcnu1O54982 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC22.25■■□□□ 1.15
Kcnu1O54982 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Kcnu1O54982 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Kcnu1O54982 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Kcnu1O54982 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Kcnu1O54982 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.24■■□□□ 1.15
Kcnu1O54982 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Kcnu1O54982 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Kcnu1O54982 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Kcnu1O54982 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Kcnu1O54982 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC22.23■■□□□ 1.15
Kcnu1O54982 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Kcnu1O54982 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Kcnu1O54982 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Kcnu1O54982 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Kcnu1O54982 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Kcnu1O54982 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Kcnu1O54982 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Kcnu1O54982 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Kcnu1O54982 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.22■■□□□ 1.15
Kcnu1O54982 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Kcnu1O54982 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Kcnu1O54982 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC22.21■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms