Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clk4O35493 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.99■□□□□ 0.79
Clk4O35493 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Clk4O35493 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.99■□□□□ 0.79
Clk4O35493 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clk4O35493 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clk4O35493 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clk4O35493 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clk4O35493 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clk4O35493 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Clk4O35493 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clk4O35493 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clk4O35493 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
Clk4O35493 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.97■□□□□ 0.79
Clk4O35493 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clk4O35493 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clk4O35493 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.96■□□□□ 0.79
Clk4O35493 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clk4O35493 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clk4O35493 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clk4O35493 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Clk4O35493 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clk4O35493 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clk4O35493 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clk4O35493 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clk4O35493 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.95■□□□□ 0.78
Clk4O35493 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Clk4O35493 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.95■□□□□ 0.78
Clk4O35493 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
Clk4O35493 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clk4O35493 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
Clk4O35493 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Clk4O35493 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clk4O35493 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Clk4O35493 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Clk4O35493 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.94■□□□□ 0.78
Clk4O35493 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clk4O35493 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clk4O35493 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clk4O35493 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.93■□□□□ 0.78
Clk4O35493 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Clk4O35493 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Clk4O35493 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Clk4O35493 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clk4O35493 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clk4O35493 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Clk4O35493 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clk4O35493 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.92■□□□□ 0.78
Clk4O35493 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Clk4O35493 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clk4O35493 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Clk4O35493 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clk4O35493 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clk4O35493 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clk4O35493 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clk4O35493 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.91■□□□□ 0.78
Clk4O35493 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clk4O35493 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clk4O35493 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clk4O35493 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clk4O35493 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Clk4O35493 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.9■□□□□ 0.78
Clk4O35493 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Clk4O35493 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clk4O35493 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clk4O35493 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.9■□□□□ 0.78
Clk4O35493 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Clk4O35493 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Clk4O35493 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Clk4O35493 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Clk4O35493 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
Clk4O35493 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Clk4O35493 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clk4O35493 Gm15820-201ENSMUST00000201566 728 ntBASIC19.89■□□□□ 0.77
Clk4O35493 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clk4O35493 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clk4O35493 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clk4O35493 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.89■□□□□ 0.77
Clk4O35493 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clk4O35493 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clk4O35493 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clk4O35493 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clk4O35493 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clk4O35493 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Clk4O35493 Gm10399-202ENSMUST00000202768 748 ntBASIC19.88■□□□□ 0.77
Clk4O35493 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clk4O35493 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clk4O35493 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Clk4O35493 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Clk4O35493 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Clk4O35493 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.87■□□□□ 0.77
Clk4O35493 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Clk4O35493 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.87■□□□□ 0.77
Clk4O35493 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clk4O35493 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.87■□□□□ 0.77
Clk4O35493 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clk4O35493 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clk4O35493 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clk4O35493 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clk4O35493 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms