Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clk3O35492 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Clk3O35492 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.77■□□□□ 0.76
Clk3O35492 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Clk3O35492 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clk3O35492 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Clk3O35492 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.77■□□□□ 0.76
Clk3O35492 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clk3O35492 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Clk3O35492 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Clk3O35492 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Clk3O35492 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clk3O35492 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clk3O35492 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clk3O35492 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clk3O35492 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
Clk3O35492 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clk3O35492 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Clk3O35492 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.75■□□□□ 0.75
Clk3O35492 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clk3O35492 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clk3O35492 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Clk3O35492 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Clk3O35492 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clk3O35492 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clk3O35492 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.74■□□□□ 0.75
Clk3O35492 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clk3O35492 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clk3O35492 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Clk3O35492 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clk3O35492 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Clk3O35492 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Clk3O35492 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clk3O35492 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clk3O35492 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Clk3O35492 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.73■□□□□ 0.75
Clk3O35492 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clk3O35492 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clk3O35492 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.73■□□□□ 0.75
Clk3O35492 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clk3O35492 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Clk3O35492 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.73■□□□□ 0.75
Clk3O35492 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
Clk3O35492 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clk3O35492 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Clk3O35492 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Clk3O35492 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Clk3O35492 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Clk3O35492 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.72■□□□□ 0.75
Clk3O35492 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clk3O35492 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Clk3O35492 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clk3O35492 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Clk3O35492 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clk3O35492 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clk3O35492 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clk3O35492 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clk3O35492 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clk3O35492 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.71■□□□□ 0.75
Clk3O35492 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clk3O35492 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clk3O35492 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clk3O35492 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clk3O35492 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clk3O35492 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clk3O35492 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clk3O35492 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clk3O35492 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.71■□□□□ 0.75
Clk3O35492 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clk3O35492 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Clk3O35492 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Clk3O35492 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Clk3O35492 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clk3O35492 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Clk3O35492 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Clk3O35492 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.7■□□□□ 0.74
Clk3O35492 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clk3O35492 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clk3O35492 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Clk3O35492 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Clk3O35492 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clk3O35492 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Clk3O35492 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clk3O35492 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clk3O35492 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.69■□□□□ 0.74
Clk3O35492 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clk3O35492 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.69■□□□□ 0.74
Clk3O35492 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clk3O35492 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clk3O35492 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clk3O35492 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clk3O35492 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clk3O35492 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clk3O35492 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clk3O35492 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clk3O35492 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clk3O35492 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clk3O35492 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clk3O35492 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clk3O35492 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms