Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Prrt1O35449 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Prrt1O35449 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Prrt1O35449 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prrt1O35449 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prrt1O35449 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Prrt1O35449 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Prrt1O35449 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prrt1O35449 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Prrt1O35449 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.63■□□□□ 0.41
Prrt1O35449 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prrt1O35449 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prrt1O35449 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prrt1O35449 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prrt1O35449 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Prrt1O35449 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Prrt1O35449 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prrt1O35449 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Prrt1O35449 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Prrt1O35449 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prrt1O35449 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prrt1O35449 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Prrt1O35449 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prrt1O35449 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.62■□□□□ 0.41
Prrt1O35449 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prrt1O35449 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.62■□□□□ 0.41
Prrt1O35449 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prrt1O35449 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prrt1O35449 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prrt1O35449 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Prrt1O35449 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Prrt1O35449 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prrt1O35449 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prrt1O35449 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Prrt1O35449 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Prrt1O35449 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.61■□□□□ 0.41
Prrt1O35449 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Prrt1O35449 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prrt1O35449 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Prrt1O35449 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Prrt1O35449 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prrt1O35449 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prrt1O35449 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prrt1O35449 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prrt1O35449 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.6■□□□□ 0.41
Prrt1O35449 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Prrt1O35449 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prrt1O35449 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Prrt1O35449 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prrt1O35449 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prrt1O35449 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prrt1O35449 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prrt1O35449 Iqck-206ENSMUST00000208658 2891 ntBASIC17.58■□□□□ 0.41
Prrt1O35449 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Prrt1O35449 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prrt1O35449 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.58■□□□□ 0.4
Prrt1O35449 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Prrt1O35449 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prrt1O35449 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prrt1O35449 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.58■□□□□ 0.4
Prrt1O35449 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Prrt1O35449 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prrt1O35449 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Prrt1O35449 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.57■□□□□ 0.4
Prrt1O35449 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Prrt1O35449 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Prrt1O35449 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prrt1O35449 Gm45364-201ENSMUST00000210883 159 ntBASIC17.57■□□□□ 0.4
Prrt1O35449 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.57■□□□□ 0.4
Prrt1O35449 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prrt1O35449 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prrt1O35449 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Prrt1O35449 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prrt1O35449 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Prrt1O35449 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prrt1O35449 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Prrt1O35449 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prrt1O35449 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prrt1O35449 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Prrt1O35449 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.56■□□□□ 0.4
Prrt1O35449 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Prrt1O35449 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Prrt1O35449 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.55■□□□□ 0.4
Prrt1O35449 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.55■□□□□ 0.4
Prrt1O35449 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Prrt1O35449 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prrt1O35449 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prrt1O35449 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prrt1O35449 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prrt1O35449 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prrt1O35449 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prrt1O35449 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prrt1O35449 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prrt1O35449 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Prrt1O35449 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prrt1O35449 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Prrt1O35449 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prrt1O35449 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prrt1O35449 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prrt1O35449 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms