Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Col15a1O35206 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Col15a1O35206 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Col15a1O35206 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC27.36■■□□□ 1.97
Col15a1O35206 Gm21168-201ENSMUST00000199646 1096 ntBASIC27.36■■□□□ 1.97
Col15a1O35206 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC27.36■■□□□ 1.97
Col15a1O35206 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Col15a1O35206 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
Col15a1O35206 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Col15a1O35206 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Col15a1O35206 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Col15a1O35206 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Col15a1O35206 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
Col15a1O35206 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
Col15a1O35206 Gm43017-201ENSMUST00000198296 752 ntBASIC27.35■■□□□ 1.97
Col15a1O35206 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC27.35■■□□□ 1.97
Col15a1O35206 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC27.34■■□□□ 1.97
Col15a1O35206 Gm4430-201ENSMUST00000192413 1943 ntBASIC27.34■■□□□ 1.97
Col15a1O35206 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Col15a1O35206 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
Col15a1O35206 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC27.34■■□□□ 1.97
Col15a1O35206 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC27.34■■□□□ 1.97
Col15a1O35206 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Col15a1O35206 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Col15a1O35206 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Col15a1O35206 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Col15a1O35206 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
Col15a1O35206 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Col15a1O35206 AC115037.1-201ENSMUST00000223391 2173 ntBASIC27.33■■□□□ 1.97
Col15a1O35206 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Col15a1O35206 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Col15a1O35206 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Col15a1O35206 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC27.33■■□□□ 1.97
Col15a1O35206 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Col15a1O35206 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Col15a1O35206 Gm5297-201ENSMUST00000198555 1171 ntBASIC27.32■■□□□ 1.96
Col15a1O35206 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Col15a1O35206 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Col15a1O35206 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Col15a1O35206 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
Col15a1O35206 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Col15a1O35206 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Col15a1O35206 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Col15a1O35206 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
Col15a1O35206 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
Col15a1O35206 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Col15a1O35206 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC27.3■■□□□ 1.96
Col15a1O35206 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Col15a1O35206 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC27.3■■□□□ 1.96
Col15a1O35206 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
Col15a1O35206 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Col15a1O35206 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC27.29■■□□□ 1.96
Col15a1O35206 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Col15a1O35206 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Col15a1O35206 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Col15a1O35206 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Col15a1O35206 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Col15a1O35206 Gm7143-201ENSMUST00000222811 859 ntBASIC27.28■■□□□ 1.96
Col15a1O35206 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Col15a1O35206 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
Col15a1O35206 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
Col15a1O35206 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
Col15a1O35206 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
Col15a1O35206 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Col15a1O35206 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Col15a1O35206 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC27.27■■□□□ 1.96
Col15a1O35206 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Col15a1O35206 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
Col15a1O35206 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
Col15a1O35206 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
Col15a1O35206 Gm8770-201ENSMUST00000121113 1109 ntBASIC27.26■■□□□ 1.95
Col15a1O35206 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Col15a1O35206 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Col15a1O35206 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Col15a1O35206 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Col15a1O35206 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
Col15a1O35206 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
Col15a1O35206 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
Col15a1O35206 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC27.24■■□□□ 1.95
Col15a1O35206 Gm12251-201ENSMUST00000117893 792 ntBASIC27.24■■□□□ 1.95
Col15a1O35206 Gm43173-201ENSMUST00000202246 593 ntBASIC27.24■■□□□ 1.95
Col15a1O35206 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Col15a1O35206 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Col15a1O35206 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Col15a1O35206 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC27.23■■□□□ 1.95
Col15a1O35206 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
Col15a1O35206 Gm8493-201ENSMUST00000196881 489 ntBASIC27.23■■□□□ 1.95
Col15a1O35206 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Col15a1O35206 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
Col15a1O35206 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Col15a1O35206 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Col15a1O35206 Wdr70-203ENSMUST00000227371 1130 ntBASIC27.22■■□□□ 1.95
Col15a1O35206 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
Col15a1O35206 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Col15a1O35206 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC27.22■■□□□ 1.95
Col15a1O35206 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Col15a1O35206 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC27.22■■□□□ 1.95
Col15a1O35206 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Col15a1O35206 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC27.21■■□□□ 1.95
Col15a1O35206 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms