Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gfra3O35118 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gfra3O35118 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Gfra3O35118 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gfra3O35118 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.06■□□□□ 0.48
Gfra3O35118 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gfra3O35118 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Gfra3O35118 Gm22238-201ENSMUST00000175222 88 ntBASIC18.06■□□□□ 0.48
Gfra3O35118 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Gfra3O35118 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gfra3O35118 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gfra3O35118 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gfra3O35118 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gfra3O35118 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Gfra3O35118 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.06■□□□□ 0.48
Gfra3O35118 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gfra3O35118 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.05■□□□□ 0.48
Gfra3O35118 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gfra3O35118 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gfra3O35118 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gfra3O35118 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gfra3O35118 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gfra3O35118 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.05■□□□□ 0.48
Gfra3O35118 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gfra3O35118 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gfra3O35118 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Gfra3O35118 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gfra3O35118 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Gfra3O35118 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gfra3O35118 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Gfra3O35118 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gfra3O35118 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gfra3O35118 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.04■□□□□ 0.48
Gfra3O35118 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gfra3O35118 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Gfra3O35118 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gfra3O35118 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.03■□□□□ 0.48
Gfra3O35118 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gfra3O35118 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.03■□□□□ 0.48
Gfra3O35118 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gfra3O35118 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.03■□□□□ 0.48
Gfra3O35118 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gfra3O35118 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gfra3O35118 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gfra3O35118 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Gfra3O35118 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gfra3O35118 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.02■□□□□ 0.48
Gfra3O35118 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gfra3O35118 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Gfra3O35118 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Gfra3O35118 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Gfra3O35118 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gfra3O35118 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gfra3O35118 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gfra3O35118 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Gfra3O35118 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.01■□□□□ 0.47
Gfra3O35118 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
Gfra3O35118 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gfra3O35118 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.01■□□□□ 0.47
Gfra3O35118 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.01■□□□□ 0.47
Gfra3O35118 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Gfra3O35118 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18■□□□□ 0.47
Gfra3O35118 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gfra3O35118 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gfra3O35118 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18■□□□□ 0.47
Gfra3O35118 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18■□□□□ 0.47
Gfra3O35118 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Gfra3O35118 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Gfra3O35118 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Gfra3O35118 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Gfra3O35118 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.99■□□□□ 0.47
Gfra3O35118 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gfra3O35118 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gfra3O35118 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
Gfra3O35118 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gfra3O35118 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gfra3O35118 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.98■□□□□ 0.47
Gfra3O35118 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gfra3O35118 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gfra3O35118 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gfra3O35118 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gfra3O35118 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gfra3O35118 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Gfra3O35118 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.97■□□□□ 0.47
Gfra3O35118 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Gfra3O35118 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gfra3O35118 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Gfra3O35118 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gfra3O35118 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gfra3O35118 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Gfra3O35118 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gfra3O35118 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gfra3O35118 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gfra3O35118 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Gfra3O35118 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Gfra3O35118 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gfra3O35118 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gfra3O35118 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gfra3O35118 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gfra3O35118 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms