Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Trove2O08848 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Trove2O08848 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trove2O08848 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trove2O08848 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Trove2O08848 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Trove2O08848 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.26■□□□□ 0.99
Trove2O08848 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trove2O08848 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.25■□□□□ 0.99
Trove2O08848 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trove2O08848 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trove2O08848 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trove2O08848 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trove2O08848 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trove2O08848 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trove2O08848 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Trove2O08848 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trove2O08848 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trove2O08848 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trove2O08848 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trove2O08848 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trove2O08848 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trove2O08848 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trove2O08848 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Trove2O08848 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trove2O08848 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trove2O08848 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.23■□□□□ 0.99
Trove2O08848 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trove2O08848 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Trove2O08848 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trove2O08848 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trove2O08848 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trove2O08848 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trove2O08848 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trove2O08848 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trove2O08848 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trove2O08848 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trove2O08848 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trove2O08848 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.22■□□□□ 0.99
Trove2O08848 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.22■□□□□ 0.99
Trove2O08848 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trove2O08848 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Trove2O08848 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trove2O08848 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trove2O08848 Mir6538-201ENSMUST00000183713 110 ntBASIC21.21■□□□□ 0.99
Trove2O08848 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trove2O08848 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trove2O08848 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trove2O08848 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trove2O08848 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Trove2O08848 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trove2O08848 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.19■□□□□ 0.98
Trove2O08848 Gm27502-201ENSMUST00000183495 199 ntBASIC21.19■□□□□ 0.98
Trove2O08848 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.19■□□□□ 0.98
Trove2O08848 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trove2O08848 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trove2O08848 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trove2O08848 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trove2O08848 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trove2O08848 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trove2O08848 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trove2O08848 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trove2O08848 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trove2O08848 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trove2O08848 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trove2O08848 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trove2O08848 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trove2O08848 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trove2O08848 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trove2O08848 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trove2O08848 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trove2O08848 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trove2O08848 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trove2O08848 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trove2O08848 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Trove2O08848 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trove2O08848 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trove2O08848 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trove2O08848 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trove2O08848 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.16■□□□□ 0.98
Trove2O08848 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trove2O08848 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trove2O08848 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.16■□□□□ 0.98
Trove2O08848 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trove2O08848 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trove2O08848 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Trove2O08848 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trove2O08848 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trove2O08848 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trove2O08848 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trove2O08848 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.14■□□□□ 0.98
Trove2O08848 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trove2O08848 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trove2O08848 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.14■□□□□ 0.97
Trove2O08848 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Trove2O08848 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.14■□□□□ 0.97
Trove2O08848 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Trove2O08848 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trove2O08848 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
Trove2O08848 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms