Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Raet1bO08603 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Raet1bO08603 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Raet1bO08603 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Raet1bO08603 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Raet1bO08603 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Raet1bO08603 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Raet1bO08603 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Raet1bO08603 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Raet1bO08603 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Raet1bO08603 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Raet1bO08603 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Raet1bO08603 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Raet1bO08603 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Raet1bO08603 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Raet1bO08603 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.52■□□□□ 0.56
Raet1bO08603 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Raet1bO08603 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Raet1bO08603 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Raet1bO08603 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.52■□□□□ 0.56
Raet1bO08603 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Raet1bO08603 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Raet1bO08603 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Raet1bO08603 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Raet1bO08603 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Raet1bO08603 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Raet1bO08603 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Raet1bO08603 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Raet1bO08603 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Raet1bO08603 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Raet1bO08603 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Raet1bO08603 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Raet1bO08603 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Raet1bO08603 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.51■□□□□ 0.55
Raet1bO08603 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.51■□□□□ 0.55
Raet1bO08603 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.51■□□□□ 0.55
Raet1bO08603 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Raet1bO08603 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Raet1bO08603 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Raet1bO08603 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Raet1bO08603 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Raet1bO08603 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Raet1bO08603 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Raet1bO08603 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Raet1bO08603 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Raet1bO08603 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Raet1bO08603 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Raet1bO08603 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Raet1bO08603 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.49■□□□□ 0.55
Raet1bO08603 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Raet1bO08603 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Raet1bO08603 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Raet1bO08603 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Raet1bO08603 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Raet1bO08603 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Raet1bO08603 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Raet1bO08603 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Raet1bO08603 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Raet1bO08603 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Raet1bO08603 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Raet1bO08603 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.48■□□□□ 0.55
Raet1bO08603 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Raet1bO08603 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Raet1bO08603 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Raet1bO08603 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Raet1bO08603 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Raet1bO08603 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Raet1bO08603 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.47■□□□□ 0.55
Raet1bO08603 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Raet1bO08603 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Raet1bO08603 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Raet1bO08603 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Raet1bO08603 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Raet1bO08603 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Raet1bO08603 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Raet1bO08603 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Raet1bO08603 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Raet1bO08603 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Raet1bO08603 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.46■□□□□ 0.55
Raet1bO08603 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Raet1bO08603 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Raet1bO08603 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raet1bO08603 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raet1bO08603 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raet1bO08603 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Raet1bO08603 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raet1bO08603 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raet1bO08603 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raet1bO08603 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.45■□□□□ 0.54
Raet1bO08603 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Raet1bO08603 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
Raet1bO08603 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Raet1bO08603 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Raet1bO08603 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Raet1bO08603 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Raet1bO08603 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Raet1bO08603 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Raet1bO08603 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Raet1bO08603 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Raet1bO08603 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms