Protein–RNA interactions for Protein: H3BKF4

Gm20708, Predicted gene 20708, mousemouse

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm20708H3BKF4 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.67■□□□□ 0.42
Gm20708H3BKF4 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm20708H3BKF4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm20708H3BKF4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm20708H3BKF4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm20708H3BKF4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm20708H3BKF4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm20708H3BKF4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm20708H3BKF4 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm20708H3BKF4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm20708H3BKF4 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm20708H3BKF4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm20708H3BKF4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.65■□□□□ 0.42
Gm20708H3BKF4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.65■□□□□ 0.42
Gm20708H3BKF4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm20708H3BKF4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm20708H3BKF4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm20708H3BKF4 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.65■□□□□ 0.42
Gm20708H3BKF4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm20708H3BKF4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm20708H3BKF4 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm20708H3BKF4 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm20708H3BKF4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Gm20708H3BKF4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Gm20708H3BKF4 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.64■□□□□ 0.41
Gm20708H3BKF4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Gm20708H3BKF4 Gm15820-201ENSMUST00000201566 728 ntBASIC17.64■□□□□ 0.41
Gm20708H3BKF4 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm20708H3BKF4 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm20708H3BKF4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Gm20708H3BKF4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm20708H3BKF4 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Gm20708H3BKF4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm20708H3BKF4 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.63■□□□□ 0.41
Gm20708H3BKF4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.63■□□□□ 0.41
Gm20708H3BKF4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.63■□□□□ 0.41
Gm20708H3BKF4 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm20708H3BKF4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm20708H3BKF4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Gm20708H3BKF4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm20708H3BKF4 Gm15546-201ENSMUST00000122095 826 ntBASIC17.62■□□□□ 0.41
Gm20708H3BKF4 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.62■□□□□ 0.41
Gm20708H3BKF4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm20708H3BKF4 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm20708H3BKF4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm20708H3BKF4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.61■□□□□ 0.41
Gm20708H3BKF4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.61■□□□□ 0.41
Gm20708H3BKF4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm20708H3BKF4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm20708H3BKF4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.6■□□□□ 0.41
Gm20708H3BKF4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm20708H3BKF4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm20708H3BKF4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.6■□□□□ 0.41
Gm20708H3BKF4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm20708H3BKF4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm20708H3BKF4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
Gm20708H3BKF4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.6■□□□□ 0.41
Gm20708H3BKF4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm20708H3BKF4 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm20708H3BKF4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm20708H3BKF4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm20708H3BKF4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm20708H3BKF4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm20708H3BKF4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm20708H3BKF4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm20708H3BKF4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.59■□□□□ 0.41
Gm20708H3BKF4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm20708H3BKF4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm20708H3BKF4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm20708H3BKF4 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm20708H3BKF4 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm20708H3BKF4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm20708H3BKF4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm20708H3BKF4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm20708H3BKF4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm20708H3BKF4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm20708H3BKF4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Gm20708H3BKF4 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm20708H3BKF4 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm20708H3BKF4 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Gm20708H3BKF4 Gm10399-202ENSMUST00000202768 748 ntBASIC17.57■□□□□ 0.4
Gm20708H3BKF4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm20708H3BKF4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Gm20708H3BKF4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm20708H3BKF4 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm20708H3BKF4 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm20708H3BKF4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm20708H3BKF4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm20708H3BKF4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm20708H3BKF4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm20708H3BKF4 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.56■□□□□ 0.4
Gm20708H3BKF4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Gm20708H3BKF4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm20708H3BKF4 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm20708H3BKF4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm20708H3BKF4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm20708H3BKF4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm20708H3BKF4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm20708H3BKF4 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Gm20708H3BKF4 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms